Gene Mboo_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1053 
Symbol 
ID5410889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1038029 
End bp1038661 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content53% 
IMG OID640868279 
Producthypothetical protein 
Protein accessionYP_001404214 
Protein GI154150596 
COG category[S] Function unknown 
COG ID[COG4749] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0317482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.124419 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA AGGCGAGCAA AAAGGTTGAA GAGGAACCCC TGAAACTCTT CTACATCTTC 
TATAACCAGG AGCGCTGGGA CAACTGGGTA AAGTCGCTTT CTGAGGCGAG TTTCGAGGTA
GACCCGAAAA GCGACGAGAT GCCCGAGGGC TTCCGGGTAC TGGACAGTTT CTCGGTAGAC
ATCACCCTTG CCGTGCTCAA GATTGTCAAG CTGTACCAGA ACAAGCGGTT CAGCAGGGAA
GAGACGCTGG ATAAGCTTGC GGCAGTCGAG GCTATTGTCA TGTCCGAGGC CCCGAAAGGC
GATCTCGAGG AGATAATTGA GATCCTCCAG CTTCCAAAGC TCGTCCTCTT TGCCTCGTCC
CGCCGGTACC TTGGCGGCGA ATTTGATAAG GACATAAAAA CGCTTGTAAA AAAGGGCAGG
GAAGCAATCG ACAAGGACAT GGAGCAGGCG TTAGAGATTG CATCCAATAT CGGTGCCGCG
GTAATCGATG GCGCTGCCTG CTGCGGGAAG TACGTCAAGG ATGATCTCGA GAACCCGACC
CTGTTTGACG AGTGGCTCAT CGAATGCGAG CGGATGTTTG AGGCCATGGG CTCGCTCAAG
AATTTCGATG AATCGACCGG AGAAGACGAG TGA
 
Protein sequence
MAKKASKKVE EEPLKLFYIF YNQERWDNWV KSLSEASFEV DPKSDEMPEG FRVLDSFSVD 
ITLAVLKIVK LYQNKRFSRE ETLDKLAAVE AIVMSEAPKG DLEEIIEILQ LPKLVLFASS
RRYLGGEFDK DIKTLVKKGR EAIDKDMEQA LEIASNIGAA VIDGAACCGK YVKDDLENPT
LFDEWLIECE RMFEAMGSLK NFDESTGEDE