Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1053 |
Symbol | |
ID | 5410889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1038029 |
End bp | 1038661 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640868279 |
Product | hypothetical protein |
Protein accession | YP_001404214 |
Protein GI | 154150596 |
COG category | [S] Function unknown |
COG ID | [COG4749] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0317482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.124419 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAA AGGCGAGCAA AAAGGTTGAA GAGGAACCCC TGAAACTCTT CTACATCTTC TATAACCAGG AGCGCTGGGA CAACTGGGTA AAGTCGCTTT CTGAGGCGAG TTTCGAGGTA GACCCGAAAA GCGACGAGAT GCCCGAGGGC TTCCGGGTAC TGGACAGTTT CTCGGTAGAC ATCACCCTTG CCGTGCTCAA GATTGTCAAG CTGTACCAGA ACAAGCGGTT CAGCAGGGAA GAGACGCTGG ATAAGCTTGC GGCAGTCGAG GCTATTGTCA TGTCCGAGGC CCCGAAAGGC GATCTCGAGG AGATAATTGA GATCCTCCAG CTTCCAAAGC TCGTCCTCTT TGCCTCGTCC CGCCGGTACC TTGGCGGCGA ATTTGATAAG GACATAAAAA CGCTTGTAAA AAAGGGCAGG GAAGCAATCG ACAAGGACAT GGAGCAGGCG TTAGAGATTG CATCCAATAT CGGTGCCGCG GTAATCGATG GCGCTGCCTG CTGCGGGAAG TACGTCAAGG ATGATCTCGA GAACCCGACC CTGTTTGACG AGTGGCTCAT CGAATGCGAG CGGATGTTTG AGGCCATGGG CTCGCTCAAG AATTTCGATG AATCGACCGG AGAAGACGAG TGA
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Protein sequence | MAKKASKKVE EEPLKLFYIF YNQERWDNWV KSLSEASFEV DPKSDEMPEG FRVLDSFSVD ITLAVLKIVK LYQNKRFSRE ETLDKLAAVE AIVMSEAPKG DLEEIIEILQ LPKLVLFASS RRYLGGEFDK DIKTLVKKGR EAIDKDMEQA LEIASNIGAA VIDGAACCGK YVKDDLENPT LFDEWLIECE RMFEAMGSLK NFDESTGEDE
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