Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1016 |
Symbol | |
ID | 5411752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 996825 |
End bp | 998441 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640868242 |
Product | putative manganese-dependent inorganic pyrophosphatase |
Protein accession | YP_001404177 |
Protein GI | 154150559 |
COG category | [C] Energy production and conversion |
COG ID | [COG1227] Inorganic pyrophosphatase/exopolyphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.597634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGA TCTACTGCTT TGGCCATCGC CAGCCCGACA CGGACAGCAT TGCAAGTGTG CTCGGGTACG CGGATTTCAA AAACCGTTCC GAGCCGGGCC GGTACGTGCC GGCGCGGTGC GGGGAACTTA ACGGCGAGTC AAAGTTCATG CTCGAACGCT ACGGTGTGGC CGCCCCGGCG TTTATTCCCA CGGTCGAACC CACCCTTGCC GATATCACGT ATAAGCCGGT CTTTGCCCTT TCCGAGGATG TCCCGGCCGT GGACGTTGCC GCCCTCATGG CAAAGGAGGA ATTACGAAAC GTGATCATCA CGGACGCAGA GGGAAAACCC GCCGGGATGA TCGGGGAGCA CGCCCTTGCC AATGCCTACA TCGATACCCT GCACCTCGCC ACCCTTGCAG TGACACCGGT GCCTATCGGG ACGCTTGCAC GGATCCTTTC TGCAGAAGTC CTGGTCAGTG CTCATGCAAC GCTTGAAGGC CGGGTGTATA TCGCGATCGA TGCCCTGCAT GTCACTCTTG CAAAGATGAC CGAGAAGGAT ATTGCGGTTG TCGGGGACAA CGAGCCGGCC CAGCTCGCAC TTGTCTCGGC AGGGATCGCG GCGCTTATCA TTGCGGAAGG CGCGCCGGTG GGAAGCCGGG TCATTTCAGC CGCACAGCAG CACCGGGTCT CGGTCCTTTC CACAAAACTC GACGCGTTCG GGGTGGGCAA GATGATCAAC CTCGCGCTTC CCGCCCGGGC CATGATGGAG ACCAGGGTCC CGGTCCTTGC CTGCACCGAA ACGATCGCAA AGGCCCGCCA GGTTGTTGCT GGTTCCACGT TCCGGGCAGC GTGCGTTGTA TCGCCGGACG GAAAACTCCG CGGCATCCTG ACCAGGACCA CGCTGCTCGA TGACGTGCGC CGCCCGGTGG TTTTGCTCGA CCACAACGAG GCCTCGCAGG CAGTCCCCGG GATCGAGGAA GCTGACGTAG TGGAGATCAT CGACCACCAC CGTCTCGGGG CGATCACCAC GCTCCGGCCC ATCCGCTTCT TCAACGACCC GGTCGGGGCC ACCTCCACGA TTATTACCAT GAAGTTCCGC GAGGCCGGCC TTAGCCCGTC ACGGGAGATC GCAGGGATCC TGTTGTGCGG CATCCTTTCA GATACGCTGG GCCTGCGCAT GTCCACAACA ACCCACCAGG ATCAAACTGC GGTAAAGTAC CTGGCGGGGA TTGCGGGGGA AGACGCGGAA AAACTCGCAG TCGAACTCCT CGAAGCCGGC ATGGACCTCT CGGGCGTACC GCTTGATGCC CTCCTGGCCC GGGATACCAA GCTCTTCACG CTTGCAGACC GGAGCGTGGA GATCGCGCAG GTTATGGTAC CGGCCTTTGC ATGGAACCGG GCCCGGGACA GCGAGATTGC CGCGGCGCTT GAAAAAGCCC GGGACAAATC GGGAGCCGCC CTCTCGCTTG CCCTCTTTAC CAATATCCCC GAAAACGCAA GCGACCTTTA CGGGGCCGGC GATGCCGGGC TGCTTACGAA AGTCTTTGGC ACGCCTCTTC CCGCCCGGCT TCCCGGGGTA ATGTCCCGAA AAAAGGATTT TGTCCCATGG CTGGGTGAAA AACTCAGGAA GTGCTGA
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Protein sequence | MTQIYCFGHR QPDTDSIASV LGYADFKNRS EPGRYVPARC GELNGESKFM LERYGVAAPA FIPTVEPTLA DITYKPVFAL SEDVPAVDVA ALMAKEELRN VIITDAEGKP AGMIGEHALA NAYIDTLHLA TLAVTPVPIG TLARILSAEV LVSAHATLEG RVYIAIDALH VTLAKMTEKD IAVVGDNEPA QLALVSAGIA ALIIAEGAPV GSRVISAAQQ HRVSVLSTKL DAFGVGKMIN LALPARAMME TRVPVLACTE TIAKARQVVA GSTFRAACVV SPDGKLRGIL TRTTLLDDVR RPVVLLDHNE ASQAVPGIEE ADVVEIIDHH RLGAITTLRP IRFFNDPVGA TSTIITMKFR EAGLSPSREI AGILLCGILS DTLGLRMSTT THQDQTAVKY LAGIAGEDAE KLAVELLEAG MDLSGVPLDA LLARDTKLFT LADRSVEIAQ VMVPAFAWNR ARDSEIAAAL EKARDKSGAA LSLALFTNIP ENASDLYGAG DAGLLTKVFG TPLPARLPGV MSRKKDFVPW LGEKLRKC
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