Gene Mboo_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1005 
Symbol 
ID5411741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp984445 
End bp985458 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content54% 
IMG OID640868231 
Producthypothetical protein 
Protein accessionYP_001404166 
Protein GI154150548 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.784899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGTTT TATCATTCAT GGCCTTCACA TCATTTCCTA TGCGGTTCTT TACCGGAGTG 
CGGCTGCGCA AAAGAGGATC CGTCCTCCTG CTCCTTCTGG TCCTTTCTCT TTTGCTCCTG
ATCCTCCCGG TTGCAGCCGA CAGTGGCTCT TCTGCGGCGG CACCGGTCGT TACAACCGGC
CCCCATGTGG TGTACATCGG CGTATATGTG GTTGATGTCA GGCAGTTTTC CGTCGGGGAT
GGGACATACT CGACCAATTT CTATCTCAGC CTCCGGTCAG ATGCAAATAT CTCGATCAAC
GACCTGGAGT TCATGAACGG GCATGCAACA TCGGTCTCCA CTATCACGGA TACTCCGGGG
GAAAAGGACT ACCGCGTGTA CGCGGAGATG ACCGCAAACC CCGACCTGCG GCGGTACCCC
TTTGACAATC ATACCCTCCC GATCATCATC GAGCCGACGA TCCTGACGGA AAAAGACCTG
GTCTTTGTTA TCGATGGGAA CAATACCGGC CTTGATGACG AGGCAAATCT CCCGGGCTGG
TCGCTCACCG GCATGTCCGC AGAAGTCACC AACCGGACCT ATGTAGAAGG CGAAGTCCCC
TATTCCCGGG TAACCTTTTC TAACGGGATA GAGCGGGATA CCGCCTCAAC ATTGCTGAAG
TTCTTTTTGC CTATTACGCT CATCATTATC GTCTCCCTTG CGTCGCTTTT GATGAAGACC
TCCTCGCGCC TCGGGCTCAA CGGCTCGATG TTTTTGGCTG CCGTTTTGAT CCACTGGCGC
ATTGCCGATG CCATTCCCCT TGTGGCCTAT GCGACCTTCC TTGATCTCTT TATGATCATC
ACGTACGCAA CGCTTGTTAT GGTCTGCGTC TCCGGTATCC TGCTCCTCAA GTTTACCGAG
GACAAAAACT CCCGGCGGAT CGAACAGGTT AACTACTGGT CGCTGCGCAT CATCCCGGCG
ATCTCAATCT CGTTCTATAT CCTGCTCTTT GTCGTGCTCA TTGTCAGCGG ATAG
 
Protein sequence
MLVLSFMAFT SFPMRFFTGV RLRKRGSVLL LLLVLSLLLL ILPVAADSGS SAAAPVVTTG 
PHVVYIGVYV VDVRQFSVGD GTYSTNFYLS LRSDANISIN DLEFMNGHAT SVSTITDTPG
EKDYRVYAEM TANPDLRRYP FDNHTLPIII EPTILTEKDL VFVIDGNNTG LDDEANLPGW
SLTGMSAEVT NRTYVEGEVP YSRVTFSNGI ERDTASTLLK FFLPITLIII VSLASLLMKT
SSRLGLNGSM FLAAVLIHWR IADAIPLVAY ATFLDLFMII TYATLVMVCV SGILLLKFTE
DKNSRRIEQV NYWSLRIIPA ISISFYILLF VVLIVSG