Gene Mboo_0827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0827 
Symbol 
ID5410457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp803914 
End bp804708 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content62% 
IMG OID640868052 
Productalpha/beta hydrolase fold 
Protein accessionYP_001403988 
Protein GI154150370 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0238202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.253698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCC CGGTTCGGAA ATGGGGAGCA GGCCCGTACT CGGTCGCGGT CATCCACGGC 
GGACCGGGCG CGCCGGGCGA GATGGCACCG GTGGCACGGG AGCTCTCCAC GGTCAAGGGT
ATCCTTGAAC CCTTCCAGAC CGAGACCACT CTTGAGGGCC AGGTCCGGGA ACTCCGTTCG
GTCCTGGAAC GTGATGCCCG GCTGCCGGTC ACGCTGGTGG GTTTTTCCTG GGGGGCATAT
CTTTCATGGA TGGTTGCTGC ACGGTACCCG GCACTGGTGG GAAAGGTAAT CCTCGTGGGT
TCTCCTCCCT TTGACGACCA GTATGCCGCA GCAATCACCC GGACCCGCCT CGAACGCCTG
AATCCGGGAG ACCGTAAGGA AGTACAGGAG ATCCAGGCGC AGATGGAAGA TCCCGGGCCG
GGAACTGGGG GCCCGGACAG GAATGTCCTG CTTGCACGGA TGGGAGACCT GATCTCCCGT
GCAGACAGTT TTGCCCCCCA GGCAAACGAT GAAAAATCGT TTGCCTGCCA GTACGAGGTG
TACCGGGGCG TCTGGGACGA GGCCTGCGAG CTTCGCCGCA AAAAAGGCCT TCTCCATATG
GCACGGGAGA TCACCTGCCC GGTGCTTGCA ATCCACGGCG ATTACGATCC TCACCCGGCA
GAAGGCGTTG AAGTCCCGCT GGAAAAGGAA CTCAAAAATT TCCGGTTTGT CCTCCTGCCC
AAATGCGGCC ACCGTCCCTG GGTCGAGCGG AACGCCGCAG AAGAGTTCTA CCGGATCCTT
ACCGGGGAGA TCTGA
 
Protein sequence
MSSPVRKWGA GPYSVAVIHG GPGAPGEMAP VARELSTVKG ILEPFQTETT LEGQVRELRS 
VLERDARLPV TLVGFSWGAY LSWMVAARYP ALVGKVILVG SPPFDDQYAA AITRTRLERL
NPGDRKEVQE IQAQMEDPGP GTGGPDRNVL LARMGDLISR ADSFAPQAND EKSFACQYEV
YRGVWDEACE LRRKKGLLHM AREITCPVLA IHGDYDPHPA EGVEVPLEKE LKNFRFVLLP
KCGHRPWVER NAAEEFYRIL TGEI