| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0697 |
|---|
| Symbol | |
|---|
| ID | 5411551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 661707 |
|---|
| End bp | 663338 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640867917 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001403858 |
|---|
| Protein GI | 154150240 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4745] Predicted membrane-bound mannosyltransferase |
|---|
| TIGRFAM ID | [TIGR03663] conserved hypothetical protein TIGR03663 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.203692 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGG CCGCTTTCTT TTCCGATAAG ATAAAACACA TTTTTACTTT CGAGAGACTT
TTCCTTCTTG TTTTTCTAGT AGCCATAGTC CTCCGGTTCT GGCACTTGGA TCTCAAATTG
TTCCATCATG ATGAGGCCAT CCACTCGTGG TTTTCTTTTA CCCTCTTGAC CAAAGGGACA
TGGATCTACG ATCCCAGCTA CCACGGCCCG TTCCTTTACT ACATCACCGC CGGGATGTTT
TCCCTCTTTG GTGCATCTGA TCTGGTGGCA AGGCTTGCCC CGGCACTATT CGGCACCCTG
CTCATTCCGC TGGTGTACTG CATTTACCGG CTGGGGTATA TCACTAAAGC ACAGACACTG
GTTGTTGCAC TGTTCCTTGC CATATCTCCC GACATGGTCT ATTTCTCCCG GTTCCTGCGC
CATGATATCT TCATGCTGTT CTTTACGATG CTGCTCCTTG TCGCCCTGCT CTATTATTTC
GAGCGGGGAC AGTTGAGGTA TGTGCTCATC GGGGCGCTTG CTGCAGGAGG GGCACTGTGC
TGCAAGGAAG AAATGCCGTT TATCCTGTTG ATATTTATCA CATTCTTCGG ATTTGCCATC
TGGAGAAAAC GGATCAGCCT GCCACCGCAA TGGAAATACG ATCTCCTGAT CGGACTGCTG
GTGATCACAG CGGTACTGGT AGCTTTTTAT TCGGCATTCG GGATGCATCC GGAAACGCTG
GTCGGGCAGA ACTTCCAGGT AAATACCACT GGCTGGTACC AGGCAGTCGA TCACTGGGTG
TCGATGTCCG ATGAACAGCG TCTGGGTGGG CCGTTTTATT TCTATATCCC CCTCTATTTG
CTCTACGAAG TACCAATATT CCTTCTGGCA ATAGTGGGAA CCCTTCAGTT TATCGTAACG
GACTCCGGCC TAATCCTCGC AGGAAGACGT CTGAAAAACT GGATTTCGAC GCGCCAGTTC
GAATTGTCAG TAGGTGATCT TGCTGCAACG AGCCGTGACC AGCTGAAATG TTCCAGAACG
GCCTCATATA AATCCGACTT TTTCTTCCAG CTCTGTATCT ACTGGATGAT CCTGACCATG
GCCTTTTATG CCTACGTCGG GGAAAAGGTG CCATGGCTTA TCATCCACCA GCTCCTCCCG
ATGTCTTTTG TTGCTGTGTA CAAACTGAAC TGGCAGAAGG TTGCCTTTGC GCTTATCGGC
TGTCTGTTCC TAGCCCTGAT GACCTGGCAT GTAGCATTTA TTCCAGCAGA TATTAATGAG
CCCATTGTCC AGGTCCAGAA TTCAGAAGAT CTAAGAAGCG TCATGGGCAT TATTGACAAT
TCGAGCCATG TAGTTCTCGC ATCACAGGAT TACTGGCCAC TGCCCTGGTA TTACCGGGGT
GATCGGTGGA ACAAGATAAC TTTCTACGGC CAGAAAGAAG ATATCGCAAC TCTTACTGCG
GAGCATCCGG ACACCATCAT CCTCCACGAT GCCGAGAGTT ATGATTCGAT ACCGGGGTAT
GATAAACAGA CCTACAAGCT GGATTACTGG TTCTCCTTTT ATGATAACCA GGATCGGTTG
CTTGACTACT ATTTCCACCG GGACGGCACC ATGGGGAGCA TTAACCTTGA CGTGTTCACC
CGGGATCGTT AA
|
|---|
| Protein sequence | MEKAAFFSDK IKHIFTFERL FLLVFLVAIV LRFWHLDLKL FHHDEAIHSW FSFTLLTKGT
WIYDPSYHGP FLYYITAGMF SLFGASDLVA RLAPALFGTL LIPLVYCIYR LGYITKAQTL
VVALFLAISP DMVYFSRFLR HDIFMLFFTM LLLVALLYYF ERGQLRYVLI GALAAGGALC
CKEEMPFILL IFITFFGFAI WRKRISLPPQ WKYDLLIGLL VITAVLVAFY SAFGMHPETL
VGQNFQVNTT GWYQAVDHWV SMSDEQRLGG PFYFYIPLYL LYEVPIFLLA IVGTLQFIVT
DSGLILAGRR LKNWISTRQF ELSVGDLAAT SRDQLKCSRT ASYKSDFFFQ LCIYWMILTM
AFYAYVGEKV PWLIIHQLLP MSFVAVYKLN WQKVAFALIG CLFLALMTWH VAFIPADINE
PIVQVQNSED LRSVMGIIDN SSHVVLASQD YWPLPWYYRG DRWNKITFYG QKEDIATLTA
EHPDTIILHD AESYDSIPGY DKQTYKLDYW FSFYDNQDRL LDYYFHRDGT MGSINLDVFT
RDR
|
|---|
| |