Gene Mboo_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0623 
Symbol 
ID5410188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp588477 
End bp589709 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content60% 
IMG OID640867842 
Producthypothetical protein 
Protein accessionYP_001403784 
Protein GI154150166 
COG category[S] Function unknown 
COG ID[COG1602] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGATCT CTCTCCAACG CATGATCCTG GGCAAAGGGG CGTACTTAAA ACAACTCACC 
GCTGCGACCA TGCAGATGAA GTCGGTGGAG GTGGGAAAGG AGCTGGCTGG CAGTTCCCCA
CCATCAGTCT TTATCGGGAG CTACAACTAC CCGGACATCT ATGCGGGCCC GATGATCGCA
CCGATGCACG GTGACACGGG CATCATGGAC CGGCCCGAGG AGTGGATTTC CCGGTGCTCG
CAGGAAGAGA TCATCGGGTA CCGGATGAAC CTGGTGAGAG GAAAACGGCT CAACAATGCC
TTTGACCTCG ACAACCGGTT CGTGGAAAAA CTCCAGGAAA TCGTGCTCTC GGAACACTCC
ATCGAGAGCG AAGCCTCGTT TGAGACCACC CCGGCCGGTT TCTCGTTTTC CGAGGAGCAT
ACACCTTTTG GGCCCAGCGC CCCGCTCGAA CGCTTCGAGA TCGAGGAAGA GCGCTGGGAC
TCTTCCCTTG AAAAGGTGTT CTATGATACC GATCTCCTCT CAAGGGACGC CATCCTCGGC
CTCCACCGGC AGGGCATGGC ATTCTCCACG ATCCAGAAGG CGTTCTCGGC CGGGACCATG
GGCCATGGAG GGAACCGGCA CCTTGTCCCG ACCCGCTGGT CAATTACCGC ATGCGACACG
ATGATCGGGG ACCACCTGCT CAAAAACGTG AAGCAGTGCC CGGTAATCGA TACCGTACGG
CTGTACGAGT ATGCGAGCCT GAACAACCGG TACGCGGTGA TCCTCCTCCC GACCGCGTGG
CAGTACGAGT GGACCGAGGC CTTTTTGCAC GTGCTCGGGA ACGAGGAGTA CGTCTTCTCC
GATTACGAGG GCTTCAAGCG AAAGACCGGC TACTCTTCGC TTGGCGGTTG CTACTATTCC
TGCAAGATGG CGGTGCTTGA GGAACTCGCC CGCGAACAGC GGCAGGCAGG TGTGATCGTG
CTGCGCGAGG CCCTGCCCGG TTATGTCCCG ATGGGGGTCT TCAATGTCCG GGAGAACGTG
CGGAGCGCAA TGCAGGAGCC GCCCAAGGAG TTCGAGGATC TCAAAGGGGC GCTCGGCCAT
GTGGCGGAGC GCTTCACCCT GCCCGTACAG CGCTTTGTCA CCGAAACAAC GCTTTTACAG
GACAGCCTCC GGCAGAAGCA GTGCACGCTC AGCGACTTTA CGCCACACAA GAAGGTCCCG
TCACTGCCAG ACGGGGCAGA GGGGACCGGG TAA
 
Protein sequence
MRISLQRMIL GKGAYLKQLT AATMQMKSVE VGKELAGSSP PSVFIGSYNY PDIYAGPMIA 
PMHGDTGIMD RPEEWISRCS QEEIIGYRMN LVRGKRLNNA FDLDNRFVEK LQEIVLSEHS
IESEASFETT PAGFSFSEEH TPFGPSAPLE RFEIEEERWD SSLEKVFYDT DLLSRDAILG
LHRQGMAFST IQKAFSAGTM GHGGNRHLVP TRWSITACDT MIGDHLLKNV KQCPVIDTVR
LYEYASLNNR YAVILLPTAW QYEWTEAFLH VLGNEEYVFS DYEGFKRKTG YSSLGGCYYS
CKMAVLEELA REQRQAGVIV LREALPGYVP MGVFNVRENV RSAMQEPPKE FEDLKGALGH
VAERFTLPVQ RFVTETTLLQ DSLRQKQCTL SDFTPHKKVP SLPDGAEGTG