| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0606 |
|---|
| Symbol | |
|---|
| ID | 5412166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 574137 |
|---|
| End bp | 574628 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640867825 |
|---|
| Product | methionine-R-sulfoxide reductase |
|---|
| Protein accession | YP_001403767 |
|---|
| Protein GI | 154150149 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.875626 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACAGA ATACGCCAAA GACAGAAGGC GGGGCAGGAG TTGTGCCGAT CTTTGATCCA
GAGACCGGCC GCGTGGAAGA ACGGACGGTC ATCCAGAAAA CCGATGCTGA ATGGCAGGCG
CAGCTGACCC CGGAACAGTT CTCGGTTGCG CGAAAACAGG GAACGGAGTA TGCGTTCACC
GGGAAATACC ATGACTGCAA GGCGCCCGGC ACGTACTGCT GTGCCTGCTG CGGCACACCG
CTCTTCTCCT CGGACACCAA GTTTGATTCC GGTACCGGCT GGCCGAGTTT TTCTGCACCG
GTATCGCCCC TTAATGTCCG TACCCATACC GACCGGTCCA ACGGCATGGT CCGGACGGAG
GTGCTTTGCG CACGGTGCAG GGCACATCTG GGGCACGTCT TTGACGATGG CCCAAAGCCA
ACCGGCAAGC GCTACTGCAT GAACTCGGCG GCGCTGGATC TCCACGTGGC ACCCGGTGAA
AAGACATGCT GA
|
|---|
| Protein sequence | MIQNTPKTEG GAGVVPIFDP ETGRVEERTV IQKTDAEWQA QLTPEQFSVA RKQGTEYAFT
GKYHDCKAPG TYCCACCGTP LFSSDTKFDS GTGWPSFSAP VSPLNVRTHT DRSNGMVRTE
VLCARCRAHL GHVFDDGPKP TGKRYCMNSA ALDLHVAPGE KTC
|
|---|
| |