Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0562 |
Symbol | |
ID | 5410766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 535253 |
End bp | 535840 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640867781 |
Product | rubredoxin-type Fe(Cys)4 protein |
Protein accession | YP_001403723 |
Protein GI | 154150105 |
COG category | [C] Energy production and conversion |
COG ID | [COG1773] Rubredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.146358 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGGAA CAAGGAAGAG TACCGGTTCT GCCGGAAAAA AACCAGCATC GCGGGCAAAA CCCCCGGCCA CATCATCGGC CCGGCCAAAG AAAGCAGCGG CGGCAACAAC TACTGTTGCT GCAAAGAAGA GTCCTGTTGC AAAAAAGACC AAAGCCGGCT CAGCAAAACC GGGAACAAAA TCCCCGGCAA AAAAGATCCC GGCGTACAAA CTGAAGCGGT ACCGGTGCAG GCTCTGCGGC TATGTGTACT CGCCGCTCCG CGGGGAACCA CATAACGGTA TCCCGGCAGG TACCCCCTTT GAAGACCTTC CCGAGGATTA CGTCTGCCCG GTCTGTGGGT ACGAGGGCAG GGGAAAGATT GGGAAATGGG GTTTTGACGA ATGGGCTCCC ACCCGGTACA TCTGCTCCAT CTGCGGGTAC GTGTACGATG AGAAACGCGG CGAACCGCAC CGGGGCATCA AACCCGGCAC AAAATTTGAC GACCTTCCGG ATGATTACAA ATGTCCTGTC TGTGCCCAGG ATCCCAAGAT CAATGTCCAG TTCGGAAAAG TACTCAAGCA AGGATTCGAG CCGCTCTACA CGGGGTAG
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Protein sequence | MPGTRKSTGS AGKKPASRAK PPATSSARPK KAAAATTTVA AKKSPVAKKT KAGSAKPGTK SPAKKIPAYK LKRYRCRLCG YVYSPLRGEP HNGIPAGTPF EDLPEDYVCP VCGYEGRGKI GKWGFDEWAP TRYICSICGY VYDEKRGEPH RGIKPGTKFD DLPDDYKCPV CAQDPKINVQ FGKVLKQGFE PLYTG
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