Gene Mboo_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0562 
Symbol 
ID5410766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp535253 
End bp535840 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content56% 
IMG OID640867781 
Productrubredoxin-type Fe(Cys)4 protein 
Protein accessionYP_001403723 
Protein GI154150105 
COG category[C] Energy production and conversion 
COG ID[COG1773] Rubredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.146358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGGAA CAAGGAAGAG TACCGGTTCT GCCGGAAAAA AACCAGCATC GCGGGCAAAA 
CCCCCGGCCA CATCATCGGC CCGGCCAAAG AAAGCAGCGG CGGCAACAAC TACTGTTGCT
GCAAAGAAGA GTCCTGTTGC AAAAAAGACC AAAGCCGGCT CAGCAAAACC GGGAACAAAA
TCCCCGGCAA AAAAGATCCC GGCGTACAAA CTGAAGCGGT ACCGGTGCAG GCTCTGCGGC
TATGTGTACT CGCCGCTCCG CGGGGAACCA CATAACGGTA TCCCGGCAGG TACCCCCTTT
GAAGACCTTC CCGAGGATTA CGTCTGCCCG GTCTGTGGGT ACGAGGGCAG GGGAAAGATT
GGGAAATGGG GTTTTGACGA ATGGGCTCCC ACCCGGTACA TCTGCTCCAT CTGCGGGTAC
GTGTACGATG AGAAACGCGG CGAACCGCAC CGGGGCATCA AACCCGGCAC AAAATTTGAC
GACCTTCCGG ATGATTACAA ATGTCCTGTC TGTGCCCAGG ATCCCAAGAT CAATGTCCAG
TTCGGAAAAG TACTCAAGCA AGGATTCGAG CCGCTCTACA CGGGGTAG
 
Protein sequence
MPGTRKSTGS AGKKPASRAK PPATSSARPK KAAAATTTVA AKKSPVAKKT KAGSAKPGTK 
SPAKKIPAYK LKRYRCRLCG YVYSPLRGEP HNGIPAGTPF EDLPEDYVCP VCGYEGRGKI
GKWGFDEWAP TRYICSICGY VYDEKRGEPH RGIKPGTKFD DLPDDYKCPV CAQDPKINVQ
FGKVLKQGFE PLYTG