Gene Mboo_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0540 
Symbol 
ID5412234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp522608 
End bp522874 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content52% 
IMG OID640867759 
Productribonuclease P, Rpp29 
Protein accessionYP_001403701 
Protein GI154150083 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1588] RNase P/RNase MRP subunit p29 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.116302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.780083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCCT GCCAGAACGT CACCCGACAC GAACTGATTG GGCTTGATGT TCTGGTAGCC 
GGCGCCACAA ACCCCCTTCA CCAGGGAGTA AGCGGACATA TCATCGATGA GACAAGGAAT
CTTGTTGCCA TCAGGACGCA GGTTGGAATA AAGAAGATCC CCAAAGCGGG ATCTCTATTC
CGCCTTTCTC TTCCTGACAA CACCCTTGTT GAGATACATG GATCCGCACT GATACTGGCT
CCGGAAAAGA GGCTCAAGCG AGCGTAA
 
Protein sequence
MISCQNVTRH ELIGLDVLVA GATNPLHQGV SGHIIDETRN LVAIRTQVGI KKIPKAGSLF 
RLSLPDNTLV EIHGSALILA PEKRLKRA