| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0492 |
|---|
| Symbol | |
|---|
| ID | 5411069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 475470 |
|---|
| End bp | 476468 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640867707 |
|---|
| Product | malate dehydrogenase |
|---|
| Protein accession | YP_001403653 |
|---|
| Protein GI | 154150035 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAAG TCACCATCAT CGGTGCAACC GGCAATGTCG GTACCTTTGC TGCCTATGCA
GTTTCTGTCG ATCCCCATGT TCATGAAATT CTGCTGTACG GCCGTGAAGG GCGCGAAGCC
TTCTTAAAAG GGCTTGCCCA GGATTTTGCC GATTCCTTTG CGGCACGGGG AACCAATATC
CGGGTTACCT GGACCACGAG CCTCAAGGAT GTGGCCGGTT CGGATATTGT TGTAATCACA
GCGGGTACTC CCCGCGGACC GGGCCAGAAT CGTCTTGACC TGGCGCTCGG GAACGCGCGG
ATCATTGCCC CGATGGCCCG TACGATCGGC ACGATTGCCC CGGATACCAA GATCATTATG
GTGACCAATC CTGTTGACGT GATGACCTGT GTTGCCCTGA AATATTCGGG CCTTAAGCCA
AACCAGGTCT TTGGTCTTGG CACGCACCTG GATTCGATGC GGCTCAAGTC ACTTATTGCA
AGTTATTTCA AAGTGCATGT CAGCGAGGTC CATACCCGTA TCATCGGGGA ACACGGGGAC
AGCATGGTGC CACTCTGGTC AGCGACCACG ATTGGCGGGA TCAAGATCTC CAACCTGCCG
GCATTTGCGC ATCTGCCGGT GCAGGATTTT ATCCAGTCTG TAAAGACCAG CGGTGAGCAG
ATTATCAAGA ACAAAGGTTC CACGGTCTAT GGCCCCGGTG AGGCTATCGC GACACTGGTT
AAAACCATCC TTGGTGATGA GAACCGGATC CTGACCGTAT CTGCATATGT GAAGAGCGAG
GTCCATGGGA TCGGAGGTGT CTGTATCGGC GTTCCTGCCC GGATCAACAA AAACGGTGCG
TTCCCGGTGA CCATCAGGAT CGATGAATCC GAGGTTATTG CCTACCGGGA ATCGGTTGAG
AAGATCCGCG CCACCATCCA CCAGATTATC GGCGAGCTGG AAAACGATAA GGATATAGGA
CCGGCAGCAC CGAAACGGCA GAAAAAAACC CGCGTGTAA
|
|---|
| Protein sequence | MSKVTIIGAT GNVGTFAAYA VSVDPHVHEI LLYGREGREA FLKGLAQDFA DSFAARGTNI
RVTWTTSLKD VAGSDIVVIT AGTPRGPGQN RLDLALGNAR IIAPMARTIG TIAPDTKIIM
VTNPVDVMTC VALKYSGLKP NQVFGLGTHL DSMRLKSLIA SYFKVHVSEV HTRIIGEHGD
SMVPLWSATT IGGIKISNLP AFAHLPVQDF IQSVKTSGEQ IIKNKGSTVY GPGEAIATLV
KTILGDENRI LTVSAYVKSE VHGIGGVCIG VPARINKNGA FPVTIRIDES EVIAYRESVE
KIRATIHQII GELENDKDIG PAAPKRQKKT RV
|
|---|
| |