Gene Mboo_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0454 
Symbol 
ID5412146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp436279 
End bp436686 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content50% 
IMG OID640867666 
Producthemerythrin-like metal-binding protein 
Protein accessionYP_001403615 
Protein GI154149997 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2703] Hemerythrin 
TIGRFAM ID[TIGR02481] hemerythrin-like metal-binding domain 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.150441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTAA TCTCATGGTC AGATGAACTG AGCGTCAGGG TAAACGAGAT TGACGATCAG 
CACAAGAAAC TCATCAGCCT CATGAACAAC CTGCACGACG CTATGCGGGC AAAGCAGGGA
AAGCAGGCTC TTGAAGCCAC CCTCCAGGAG CTTGCAGCAT ACACCGTGTA CCATTTCCAG
ACAGAAGAAA AATACATGCA GAAATTCCAT TACCCGCAGT TTGCTACACA CAAAGCGCAG
CACGATGCCT TTGTCAAGAA AGTCTCGGAC TTCCAGAAGG AGTTCGAGGC CAACCGGCTG
GGGCTTTCCA TCGAACTGAT GAATTTCCTG AGGGACTGGG TCTCCAACCA CATCAAGTCT
ACCGACAAGC AATATTCCGC AACCTTTGTC GAAAACGGAC TCAAGTGA
 
Protein sequence
MALISWSDEL SVRVNEIDDQ HKKLISLMNN LHDAMRAKQG KQALEATLQE LAAYTVYHFQ 
TEEKYMQKFH YPQFATHKAQ HDAFVKKVSD FQKEFEANRL GLSIELMNFL RDWVSNHIKS
TDKQYSATFV ENGLK