Gene Mboo_0443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0443 
Symbol 
ID5411066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp424148 
End bp425902 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content55% 
IMG OID640867655 
Productpotassium-transporting ATPase, A subunit 
Protein accessionYP_001403604 
Protein GI154149986 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2060] K+-transporting ATPase, A chain 
TIGRFAM ID[TIGR00680] K+-transporting ATPase, KdpA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.393361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTAA ACGACTGGGC ATTCCTTGTC CTGATCGGCG TCATCCTCGC ACTCCTTCTT 
ATTCCCACAG GAGAGTTCAT GTTCCGGGTC TACACGGGAA AAAAGACCTT CCTTTCGCCG
CTGTTTGTAC CGGTGGAAGC GTGGATCCTT AAGGCATGCG GTGCCGGCAG CGACGAGGAA
ATGGACTGGA AATCCTTTGC TGTGGCGATG ATGATCTTTT CCGTCATCGG TATCGTATTT
GTATTCATCC TTCAGGAAGT CCAGCAGTTC CTGCCGCTCA ACCCGCTTGG TGCCACAGCG
GTGCCCTGGG ACCTCTCGCT CAACACTGCG GTCAGTTTTG CAACAAACAC CAACTGGCAG
TTCTATGTCC CCGAGACAAC GGTCAGCTAC CTGACCCAGA TGATCGGGCT TACAGTCCAG
AACTTCATGT CTGCCGCTGT GGGTATGGTG GTGCTTGTTG CCTTCATCTA CGGTTTCTCC
CGCAGGTCGT CACATACAAT CGGGAACTTC TGGGTATTGC TCCTCCGCAG CATCTGGATC
CTCCTTCCCC TCAGTTTTGT CATTGCCCTT GTCCTTGTCT CGCAGGGAGC GCCCCAGACG
CTTAGCGGGC CGGTGACCGT TCCCCTTCTT AACGCGACAA ACGACTCAGG TGGCAACATC
ATTACCACGC AGCTGATCTC CCTTGGGCCG GCCGCGTCAC AGATTGCCGT AAAGATGCTC
GGTACCAATG GCGGCGGGTT CTTCAATGCC AATTCGGCGC ATCCTTTCGA GAATCCGACG
TGGTTTACGG ACCTTGTCGA AATTGTTGCG ATCCTTTTGA TCCCGGTCTC GCTCTGTTTC
ATGTTCGGGA AGATGATTGG ATCGGTAAAG AAGGGAATCG CCATCCTGAT TGCGATGATG
ATTCTCTTTG TTCCTCTCCT TGGCTTGGGG ATCTGGTCAG AGATCGGCGG AAATCCGGCG
TTCACTCCGC TTGGGATCAG CCAGGCGCCC TCACACCTCC AGTCCGGTGG CAACATGGAA
GGAAAGGAGG TACGCTTCGG CCCGGTCCAG TCGGCAGCAT TCTCGGTGAT TACTACGGTC
ACGAGCTGCG GTGCGGTCAA TTCGATGCAT GATTCGTTCA TGCCGCTCGG TGGCCTTGTC
CAGATCTTCG ATATCCAACT GGGCGAGATC GTGTTTGGAG GCGTCGGATC CGGGCTGTAC
TGCATGCTCG TCTTTGTCAT CATCGCCATG TTTATTGCCG GGCTGATGGT GGGCAGGACG
CCCGAGCTGT ACGGCAAGAA GATCGAGCCG TACGAGATGA AACTCTCTAC CATCCACATT
CTCATCCCGA TCTTTTTGAT CCTGATCGGG ACGGCGATCG CGGTATCGAT AACCGCAGGA
ACATCGATGA CTGCGAACCC CGGACCTCAC GGTTTCTCCG AGATCCTGTA CGCGTTTAGT
TCAGTCTCCC AGAACAACGG CAGCGCGTTT GCCGGGTTGT CATCAGACAC GTTCTATAAC
CTTACAACTG CATTCTGCAT GTTTGTGGGG CGTTATGCGA TCGCTATCAT CACGCTTGCG
CTCGCTGGCG CGTTCGTGGC AAAAAAGATC GTCCCGCCAG GTGAAGGGAC ACTGCAGGAC
CACCGTCCGC TTTTTATTAT CTGGGTGGTA TTTACCATCC TCATCATCGG TGCACTCAGT
TTCCTGCCTG CGCTCTCCCT TGGACCTGTC GTAGAATTCC TGATCCAGAT GGGAAGAGGT
GTTATCCATG TCTGA
 
Protein sequence
MSVNDWAFLV LIGVILALLL IPTGEFMFRV YTGKKTFLSP LFVPVEAWIL KACGAGSDEE 
MDWKSFAVAM MIFSVIGIVF VFILQEVQQF LPLNPLGATA VPWDLSLNTA VSFATNTNWQ
FYVPETTVSY LTQMIGLTVQ NFMSAAVGMV VLVAFIYGFS RRSSHTIGNF WVLLLRSIWI
LLPLSFVIAL VLVSQGAPQT LSGPVTVPLL NATNDSGGNI ITTQLISLGP AASQIAVKML
GTNGGGFFNA NSAHPFENPT WFTDLVEIVA ILLIPVSLCF MFGKMIGSVK KGIAILIAMM
ILFVPLLGLG IWSEIGGNPA FTPLGISQAP SHLQSGGNME GKEVRFGPVQ SAAFSVITTV
TSCGAVNSMH DSFMPLGGLV QIFDIQLGEI VFGGVGSGLY CMLVFVIIAM FIAGLMVGRT
PELYGKKIEP YEMKLSTIHI LIPIFLILIG TAIAVSITAG TSMTANPGPH GFSEILYAFS
SVSQNNGSAF AGLSSDTFYN LTTAFCMFVG RYAIAIITLA LAGAFVAKKI VPPGEGTLQD
HRPLFIIWVV FTILIIGALS FLPALSLGPV VEFLIQMGRG VIHV