| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0439 |
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| Symbol | |
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| ID | 5411872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 420236 |
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| End bp | 421819 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640867652 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001403601 |
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| Protein GI | 154149983 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.536998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCAT CAACAGAAGC AAACCAGACT GCGGTTCCTA AAACCGGAAC CATGAAACGC
ACGCTGAACC TGACCTCGCT TTTGGTCAAC GCCATGGCGC TTATTGCGCC GGGAGCTTTT
CTTTGGACTA CATTCCAGGT GCAGGCAGCG CAGACCAATG GCGGGGTGAC AACTGCCGGG
GAGATGTGGA CTGGCCTTTT GGCCGCACTG GTCCTTGCAT TCTTAACCGC CATATCGTAC
GCGGAACTGG CAAACATCTA TCCAAAAGCC GGCTCCGGTT CGTCCTATTA CTACGCGGAA
GCCTCATTTC TTGAAAAAGA AAAAGCAGAA CATCGTAAAT GGGCAAGGAT AGTCAAATTC
CTTGTAGGCT GGATATCACA CTTGTATTAC TGGATTTATC CCGGTATCAT GGTGGCCTTC
TCTGCCATCC TGATCGTGTA CATCTTCGGC CTCTTTGGGA TCAATCTCTC GATCCCGGAG
CAGATCCTTG TTGCCATCGT CTTTGCGGTC CTCAATGGCT ACATCGCGTA CCGCGGCATC
ACCGGGTCAA CGATGACTGC GATCATCATC AACACCATCC AGCTTGCGGC CCTGATCGCG
TTCTCGATCC TTGCCCTCCT GTACCGCCAG GCGCACCCGA ACCTCGCCTA TGCGCAGTCC
GTTTCGACAA TCCTCATACC GCACAACTTC ACAAACCTGC TCTTCCAGTC AACCATCGCT
ATCCTGCTGC TGGTCGGCTT TGAATCAGTC ACATCGCTTG GCTCGGAAGC ACTCAGGCCA
AAACAGGATA TTAAAAAAGC GATCCTGCTC TCGCTTATCA TCCAGGGAGC ATTCGCCTAC
CTGTTCGAGT ACTTTGCTGC CAACTACTTC GTCGGGCCCC AGCTGACCGG GACCGATCCC
ACCGGGGCTG CGATCTCAGG CTATGCAGCT GCAGCCGCAT CCGGTGCCCC TATCGGAGAT
ATGATCCGGG TAATCGGCGA CCAGATGCTG GGAGGCACCG GCTTTGCACT GGTGTTAATC
ATGGCAGCAA CGGTGGTCCT TGCCCTGATC GGGACAACGC TTGCCTGCCT TAACACCGGG
GTCAGGATCA CGTACGCGAT GGGCAAAGAC AAAGAGATGC CCACCCTGCT TGGGATCCTT
CACGGAACAT ATGACACACC GCACTATGGC ATCTGGATCC TTGTCGGGGT ATCTGCAGCC
CTTGGGGCAT ACGGTGTCCT CAATGTGGAT AACCTGACCC AGATCACGCT TGCATCCAAT
ACCGGGACAT TCCTCCTGTA CGGCCTGACA AATCTTATTG CACTCTGGGC ATTCTTCCAC
CGTCCGGATG CAAACCTCCT CAAACACCGG ATAGTACCGC TGCTCGGATT TTTGGCAAAC
TTCGTCATGC TTGCCGCAAT AGTCTGGCTT GGGATCAGTG CCGGTGGCAG CTCCGCAACC
GACGCTCTCA TTGCAATCGC CATGGTTATA GTCTGGCTGG TTGCCGGCGT AATCTGGTTT
ATCTCCAACA CGAAAAAACA GCAACGCCCC ATTATGACCG GGAACCTGCC CCAGGCAAAA
GGGCTGGAAG TTGACGACGC CTAA
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| Protein sequence | MTSSTEANQT AVPKTGTMKR TLNLTSLLVN AMALIAPGAF LWTTFQVQAA QTNGGVTTAG
EMWTGLLAAL VLAFLTAISY AELANIYPKA GSGSSYYYAE ASFLEKEKAE HRKWARIVKF
LVGWISHLYY WIYPGIMVAF SAILIVYIFG LFGINLSIPE QILVAIVFAV LNGYIAYRGI
TGSTMTAIII NTIQLAALIA FSILALLYRQ AHPNLAYAQS VSTILIPHNF TNLLFQSTIA
ILLLVGFESV TSLGSEALRP KQDIKKAILL SLIIQGAFAY LFEYFAANYF VGPQLTGTDP
TGAAISGYAA AAASGAPIGD MIRVIGDQML GGTGFALVLI MAATVVLALI GTTLACLNTG
VRITYAMGKD KEMPTLLGIL HGTYDTPHYG IWILVGVSAA LGAYGVLNVD NLTQITLASN
TGTFLLYGLT NLIALWAFFH RPDANLLKHR IVPLLGFLAN FVMLAAIVWL GISAGGSSAT
DALIAIAMVI VWLVAGVIWF ISNTKKQQRP IMTGNLPQAK GLEVDDA
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