Gene Mboo_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0352 
Symbol 
ID5411118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp343565 
End bp344419 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content32% 
IMG OID640867566 
Producthypothetical protein 
Protein accessionYP_001403515 
Protein GI154149897 
COG category[S] Function unknown 
COG ID[COG3339] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00316241 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.651625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGACA AACAAAATGA TTACCCTCAA ATAGACATAG GAATTAAAAA TCGAAAAATA 
CCTCGGTTAA GATATTCTAT TATCGAGTCC CTTACGGATG TTGAGAATCA GGAAATATCG
TTTTTGGATT TTCTCACAAA AAATATTAAA ATATACAACG GTCCAAACAA GGAACTTCAA
CAATATTGTC CAATATTTTT TGAACTCTTA TCAAATATTA TCAACGACAA ATTTGTAGAT
TGGCACACGA AAATTATGAT AAGTGCGGCA TTAGGATATT TTGTTCTTGA AGAGGATGTT
ATTCCCGATA TTGCAGAAAA TGGTTATGTC GATGATTTAT ATCTTGTAAC CTACGTCCTT
AATGAAATCA AGGTTACTCA GTCTCCTGAA ATTATTCTCC GTAACTGGAG CAGAAAAGAA
GATATCCTCC AATTAATCGA TGATGTTTTT ATTAAAGCGA GCGAGATTGT CGGACCCCTC
TCGAAAAACA TACTTCAAAA AGTTGGTCTT TACAAATTCT CTCTACTCTC TCTTGAAGAA
TATTCTGGAG TATATCCCAA AAGATACGCA ACGGTGGCAA GAGAAAAAAG GGAATTGATC
GGTCTTTTGG CTTATATCAT TCAACACATC AAGGGGGATG ATCTGTACAG AAGTAGTTAT
GAAAAAATCA GGAAATATAT AGAAAACGAT GGAAATTTTG ATGAAATTCA AAGAATAATT
GAAATTTCAA AACTTTATCA TAAAATCGAT GTGGAATCTA TTGATAAACC TGAAGACTTT
GTAAAACTAT TAGAACAAAG AATGCGGGAA GCACGTTTGA AAGCATTAAA AGAAAAGAAT
GATAAAAATC AATAA
 
Protein sequence
MMDKQNDYPQ IDIGIKNRKI PRLRYSIIES LTDVENQEIS FLDFLTKNIK IYNGPNKELQ 
QYCPIFFELL SNIINDKFVD WHTKIMISAA LGYFVLEEDV IPDIAENGYV DDLYLVTYVL
NEIKVTQSPE IILRNWSRKE DILQLIDDVF IKASEIVGPL SKNILQKVGL YKFSLLSLEE
YSGVYPKRYA TVAREKRELI GLLAYIIQHI KGDDLYRSSY EKIRKYIEND GNFDEIQRII
EISKLYHKID VESIDKPEDF VKLLEQRMRE ARLKALKEKN DKNQ