Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0352 |
Symbol | |
ID | 5411118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 343565 |
End bp | 344419 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640867566 |
Product | hypothetical protein |
Protein accession | YP_001403515 |
Protein GI | 154149897 |
COG category | [S] Function unknown |
COG ID | [COG3339] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00316241 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.651625 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGACA AACAAAATGA TTACCCTCAA ATAGACATAG GAATTAAAAA TCGAAAAATA CCTCGGTTAA GATATTCTAT TATCGAGTCC CTTACGGATG TTGAGAATCA GGAAATATCG TTTTTGGATT TTCTCACAAA AAATATTAAA ATATACAACG GTCCAAACAA GGAACTTCAA CAATATTGTC CAATATTTTT TGAACTCTTA TCAAATATTA TCAACGACAA ATTTGTAGAT TGGCACACGA AAATTATGAT AAGTGCGGCA TTAGGATATT TTGTTCTTGA AGAGGATGTT ATTCCCGATA TTGCAGAAAA TGGTTATGTC GATGATTTAT ATCTTGTAAC CTACGTCCTT AATGAAATCA AGGTTACTCA GTCTCCTGAA ATTATTCTCC GTAACTGGAG CAGAAAAGAA GATATCCTCC AATTAATCGA TGATGTTTTT ATTAAAGCGA GCGAGATTGT CGGACCCCTC TCGAAAAACA TACTTCAAAA AGTTGGTCTT TACAAATTCT CTCTACTCTC TCTTGAAGAA TATTCTGGAG TATATCCCAA AAGATACGCA ACGGTGGCAA GAGAAAAAAG GGAATTGATC GGTCTTTTGG CTTATATCAT TCAACACATC AAGGGGGATG ATCTGTACAG AAGTAGTTAT GAAAAAATCA GGAAATATAT AGAAAACGAT GGAAATTTTG ATGAAATTCA AAGAATAATT GAAATTTCAA AACTTTATCA TAAAATCGAT GTGGAATCTA TTGATAAACC TGAAGACTTT GTAAAACTAT TAGAACAAAG AATGCGGGAA GCACGTTTGA AAGCATTAAA AGAAAAGAAT GATAAAAATC AATAA
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Protein sequence | MMDKQNDYPQ IDIGIKNRKI PRLRYSIIES LTDVENQEIS FLDFLTKNIK IYNGPNKELQ QYCPIFFELL SNIINDKFVD WHTKIMISAA LGYFVLEEDV IPDIAENGYV DDLYLVTYVL NEIKVTQSPE IILRNWSRKE DILQLIDDVF IKASEIVGPL SKNILQKVGL YKFSLLSLEE YSGVYPKRYA TVAREKRELI GLLAYIIQHI KGDDLYRSSY EKIRKYIEND GNFDEIQRII EISKLYHKID VESIDKPEDF VKLLEQRMRE ARLKALKEKN DKNQ
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