| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0223 |
|---|
| Symbol | |
|---|
| ID | 5411823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 210826 |
|---|
| End bp | 211992 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640867437 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_001403388 |
|---|
| Protein GI | 154149770 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACGTA AAGGACGATT CGGAAAATAC GGCGGGCAGT ACGTGCCGGA AACCCTGATG
AACGCACTTA TCGAGCTTGA ATGCGCATAC CGGGACGCGA CGCACGATCC GGCATTTGCA
CAGGAACTTG CAGCATACCA GTCAGAATAC GCCGGGCGCC CCACACCGCT TACGTTCTGT
GGGAACATCT CCCGGGACCT CGGCTTTAAG GTGTATCTCA AACGGGAGGA TCTGGTCCAT
GGCGGTTCTC ACAAGCTCAA CAACACGCTG GGCCAAGCGC TTCTTGCCAA ACGGATGAGA
AAGAAACGGC TGATTGCGGA AACCGGCGCC GGCCAGCACG GGGTCGCAAC CGCAATTGCC
GGGGCCGCGC TCGGCTTTAA GGTCGAGGTC TTCATGGGCG AGGTGGATAC AAAACGCCAG
GCCCTCAACG TCTTCCGGAT GGAATTGATG GGAGCAACGG TCCACCCGGT AACCTGCGGG
ACAAAGACGC TCAAGGACGC GACAAACGAA GCGCTCCGTG ACTGGGTCGC AAACGTAAAC
GACACGCATT ATCTGATCGG ATCGGTGGTC GGACCGCACC CGTTCCCGAC AATTGTCCGC
GACTTCCAGT CCGTGATCGG GCGCGAGGCC CGCCAACAGG TCATGCGAAA GGAGGGAAAG
ATGCCGGACG CGATTGTTGC CTGCGTGGGT GGCGGCTCAA ATGCGATCGG CATCTTCCAC
CCCTTCCTTG CCGATGATGT AGAGCTCATC GGCATCGAAG CGGCCGGCAA AGGCCTCGAT
ACCCCGGAAC ACTCCGCAAC GCTCTGTGCG GGAGATCCCG GCGTGCTCCA CGGCACGCTC
TCGTACCTGC TTCAGGACAA CAACGGCCAG GTGCTTCCTA CGCACAGCGT GGCGGCAGGT
CTCGATTACC CGGGTGTCGG CCCCGAGCAC GCGATGCTCA AAGATTCGCA CCGGGTTGCA
TACTACGCGG TAAAAGACCA CGAAGTGCTT GACGCCTTCC GGTACCTTTC GCGGACCGAA
GGGATCATCC CGGCGCTCGA ATCCTCACAC GCGGTGGCGT ACGTGCTGCA GAACTGTGAC
CGGTTCGATA AGGGCGATGT GGTGATCATC AATCTTTCAG GCCGGGGCGA CAAGGATGTC
GCAGGCATTG TACCGGAGGC GGCATGA
|
|---|
| Protein sequence | MGRKGRFGKY GGQYVPETLM NALIELECAY RDATHDPAFA QELAAYQSEY AGRPTPLTFC
GNISRDLGFK VYLKREDLVH GGSHKLNNTL GQALLAKRMR KKRLIAETGA GQHGVATAIA
GAALGFKVEV FMGEVDTKRQ ALNVFRMELM GATVHPVTCG TKTLKDATNE ALRDWVANVN
DTHYLIGSVV GPHPFPTIVR DFQSVIGREA RQQVMRKEGK MPDAIVACVG GGSNAIGIFH
PFLADDVELI GIEAAGKGLD TPEHSATLCA GDPGVLHGTL SYLLQDNNGQ VLPTHSVAAG
LDYPGVGPEH AMLKDSHRVA YYAVKDHEVL DAFRYLSRTE GIIPALESSH AVAYVLQNCD
RFDKGDVVII NLSGRGDKDV AGIVPEAA
|
|---|
| |