Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0181 |
Symbol | |
ID | 5410225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 176955 |
End bp | 177845 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640867396 |
Product | hypothetical protein |
Protein accession | YP_001403347 |
Protein GI | 154149729 |
COG category | [S] Function unknown |
COG ID | [COG1865] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.808143 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATATT ATACCAAGAA CTCAACCCTT TTTGTCCGCG GTGCATTCCG CGCCGCGAGT ACCGGTATTG ATGGAGGGAT CCGGGATGTC ACCACCCTGT TCAACCACAC GGTGCCTGCC GACTGGAGCC ACGACAGCCC CAAAAAAGAG ATCGAACTGG TCGCTGCTGC GGCCGGTATC GGCCCTTGTG TTTTCGGCCT CCTTACTGCC GTTCCCCTCC GGCACCTCTG CGTGCTCCAG TACGATTTTG TCACGGTCTT TGTGACCGCC GGCATCCGGG AGCATCCCCC GCAGGAGGCC GGGACCATCA ATATCATCGT ATACAGCAGC GAGGGGATGG AGGATTCAGC GCTGCTCGAA ATGATTCTGG TTGCCACCGA GGCAAAGGCC GAGGCCCTGA TCGCGGCCGG CCGGGATTCG GGAACTCCCA CCGATGCCGT GATCGCCGCG TGCGAAGGGG AAAAACTGCA CCGGTACGCC GGGCGGATCA CGGAACCCGG CCAGAGACTG CGGGAAGCCG TGCTCAAAGG TGTGCCCGAG GCCCTGCGCC GGTACGAACG TGGGGCGGAA AACGAGGAAC CGGCCTTTTT TATTTACAGC CGGTTAGAGG GGGGGCACTG GGTGGAGTGG TCGCCGGTCA ACTGCCCCTA TTACCCCTGC CATTTTCCCG GGCAGCGCTG CGACTTCTGC TACTGCCCGT TCTACCCGTG CAAAAACGAG GCGCTCGGCG ACTGGTCTGT GAGTTCCTCC GGAGGGAAGG TCTGGAGCTG CTCGCGCTGC ACCCTTATCC ATGAGCCGGC GGTCGCGGAC TACCTCAAAC GCTATCCCGA TGCCCCGCTC GACGAGCTGG TGCAGTACCA AAAACAACAG AAAAAGAAGA TTATTCCTTG A
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Protein sequence | MRYYTKNSTL FVRGAFRAAS TGIDGGIRDV TTLFNHTVPA DWSHDSPKKE IELVAAAAGI GPCVFGLLTA VPLRHLCVLQ YDFVTVFVTA GIREHPPQEA GTINIIVYSS EGMEDSALLE MILVATEAKA EALIAAGRDS GTPTDAVIAA CEGEKLHRYA GRITEPGQRL REAVLKGVPE ALRRYERGAE NEEPAFFIYS RLEGGHWVEW SPVNCPYYPC HFPGQRCDFC YCPFYPCKNE ALGDWSVSSS GGKVWSCSRC TLIHEPAVAD YLKRYPDAPL DELVQYQKQQ KKKIIP
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