Gene Mboo_0181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0181 
Symbol 
ID5410225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp176955 
End bp177845 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content61% 
IMG OID640867396 
Producthypothetical protein 
Protein accessionYP_001403347 
Protein GI154149729 
COG category[S] Function unknown 
COG ID[COG1865] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.808143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATATT ATACCAAGAA CTCAACCCTT TTTGTCCGCG GTGCATTCCG CGCCGCGAGT 
ACCGGTATTG ATGGAGGGAT CCGGGATGTC ACCACCCTGT TCAACCACAC GGTGCCTGCC
GACTGGAGCC ACGACAGCCC CAAAAAAGAG ATCGAACTGG TCGCTGCTGC GGCCGGTATC
GGCCCTTGTG TTTTCGGCCT CCTTACTGCC GTTCCCCTCC GGCACCTCTG CGTGCTCCAG
TACGATTTTG TCACGGTCTT TGTGACCGCC GGCATCCGGG AGCATCCCCC GCAGGAGGCC
GGGACCATCA ATATCATCGT ATACAGCAGC GAGGGGATGG AGGATTCAGC GCTGCTCGAA
ATGATTCTGG TTGCCACCGA GGCAAAGGCC GAGGCCCTGA TCGCGGCCGG CCGGGATTCG
GGAACTCCCA CCGATGCCGT GATCGCCGCG TGCGAAGGGG AAAAACTGCA CCGGTACGCC
GGGCGGATCA CGGAACCCGG CCAGAGACTG CGGGAAGCCG TGCTCAAAGG TGTGCCCGAG
GCCCTGCGCC GGTACGAACG TGGGGCGGAA AACGAGGAAC CGGCCTTTTT TATTTACAGC
CGGTTAGAGG GGGGGCACTG GGTGGAGTGG TCGCCGGTCA ACTGCCCCTA TTACCCCTGC
CATTTTCCCG GGCAGCGCTG CGACTTCTGC TACTGCCCGT TCTACCCGTG CAAAAACGAG
GCGCTCGGCG ACTGGTCTGT GAGTTCCTCC GGAGGGAAGG TCTGGAGCTG CTCGCGCTGC
ACCCTTATCC ATGAGCCGGC GGTCGCGGAC TACCTCAAAC GCTATCCCGA TGCCCCGCTC
GACGAGCTGG TGCAGTACCA AAAACAACAG AAAAAGAAGA TTATTCCTTG A
 
Protein sequence
MRYYTKNSTL FVRGAFRAAS TGIDGGIRDV TTLFNHTVPA DWSHDSPKKE IELVAAAAGI 
GPCVFGLLTA VPLRHLCVLQ YDFVTVFVTA GIREHPPQEA GTINIIVYSS EGMEDSALLE
MILVATEAKA EALIAAGRDS GTPTDAVIAA CEGEKLHRYA GRITEPGQRL REAVLKGVPE
ALRRYERGAE NEEPAFFIYS RLEGGHWVEW SPVNCPYYPC HFPGQRCDFC YCPFYPCKNE
ALGDWSVSSS GGKVWSCSRC TLIHEPAVAD YLKRYPDAPL DELVQYQKQQ KKKIIP