Gene Mboo_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0162 
Symbol 
ID5411542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp158645 
End bp159844 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content58% 
IMG OID640867377 
Productpeptidase M24 
Protein accessionYP_001403328 
Protein GI154149710 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTTC CCGCACGCGA ACTTACTTCC CGGCTTGCCC GGTTCCGGGC AGAGATGGAC 
CTCCGCTCGC CCGGCTGGTC GCTTGCCGCC ATCACCGAAA GGATCAACCT GTACTATTTT
ACCGGCACCA TCCAGGATGG CCTGCTCCTT ATTCCCCGGG GTGGCGATGC CGTGTTCTGG
GTGCGGAAAA GCTTCGAGCG GGCGCAGTGC GAATCGCTCT TTCCTGATAT CCGGCCCATG
AAGAGTTACC GGGACGCAGC CGCGGCAACC CGCCCGGTAC AAGGGCCGGC GTACCTGGAG
CTCGATTCTG TTACGCTCGC ACAGTACGGG CGGATGCAGA AACATTTTGC CTTTTCCGCC
CCCCCGCTCG CGCTTGATGC GCAGGTGGCC GCAGTCCGGG CAGTAAAAAG CCAGTACGAG
CTTTCTCTCA TGGAAAAGGC CGGGAAGATC CACCGGCACG TGTTTGAGGA TTGCATCCCG
GATCTCCTGG TCGAAGGCAT GGATGAGATT GAATTTGGCA CCCGGCTCTA TTCGCTCATG
ATGCAGGAGG GCCACCAGGG AATTGTCCGG TTCCGGATGT TTAACGAGAT GCTTCTTGGC
CAGGTTGGTT TTGGGGTAAG CACGATCACG CCCACGTGTG TGGATACACC CGGGGGGATC
TCCGGGCTCC ACCCTGCCAT CCCGCTGATG GGAAACCGGG AGAAAAAACT TAACAAAGGC
GATCTCGTGG TGGTTGATAC CGGCTGCGGG GTCGAAGGCT ACCATACCGA CAAGACCATG
AACTATATGT TCGGGAAGGC GATTCCCGAC GCGGCCATCA AGGTTCACGA GAAGTGTGTT
GCGGTGCAGG ATGAGGTGGC GTCAATGTTG AAACCGGGTG CTGTACCTTC AGAGATCTAT
GCCACGGTGG TGGCCGGCCT CTCCCCGGAA TTTAAGGACG GGTTCATGGG ATTTGGACAG
AACACCGTGA AGTTCCTTGG CCACGGCATC GGGCTTGAGA TTGACGAGAG CCCGGTCATT
GCGCCGGGTT TTGACGAACC CCTGCAGGAA GGGATGGTTT TTGCAATCGA GCCAAAGAAA
GGAATTGCCG GCCTTGGCCT GGTCGGGATC GAGAACACTT TTGTTGTGAC CCCGCAGGGT
GGCCGGTCCC TGACCGGCAA CAACCGCGGA TTAATCCCGG TCGGATTTTT GACCGGGTAA
 
Protein sequence
MQVPARELTS RLARFRAEMD LRSPGWSLAA ITERINLYYF TGTIQDGLLL IPRGGDAVFW 
VRKSFERAQC ESLFPDIRPM KSYRDAAAAT RPVQGPAYLE LDSVTLAQYG RMQKHFAFSA
PPLALDAQVA AVRAVKSQYE LSLMEKAGKI HRHVFEDCIP DLLVEGMDEI EFGTRLYSLM
MQEGHQGIVR FRMFNEMLLG QVGFGVSTIT PTCVDTPGGI SGLHPAIPLM GNREKKLNKG
DLVVVDTGCG VEGYHTDKTM NYMFGKAIPD AAIKVHEKCV AVQDEVASML KPGAVPSEIY
ATVVAGLSPE FKDGFMGFGQ NTVKFLGHGI GLEIDESPVI APGFDEPLQE GMVFAIEPKK
GIAGLGLVGI ENTFVVTPQG GRSLTGNNRG LIPVGFLTG