Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3691 |
Symbol | |
ID | 3624635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4751603 |
End bp | 4752883 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637702523 |
Product | DNA-directed RNA polymerase subunit A'' |
Protein accession | YP_307134 |
Protein GI | 73671119 |
COG category | [K] Transcription |
COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
TIGRFAM ID | [TIGR02389] DNA-directed RNA polymerase, subunit A'' |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.219403 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATCA GTGAAAGTAC AATCGATAGT ATGATAAAGG ACCTGCCTCT CCCTTCGAAT ATCCTTAATA CTCTAAGAGA GGATGTCATC AAAGCCGGAG TAAGTAAGAA GGAAATGGAA GAGATTATAG AACAGGTAAT GGAAGAATAT CGTAGCTCGT GCATTGAGCC CTGTGATGCT GCCGGTGTGG TTGCAGCCCA GTCCATAGGG GAGCCGGGTA CTCAGATGAC AATGCGTACT TTCCACTATG CTGGTGTGGC CGAGATTAAC GTTACTCTCG GTCTTCCCCG TCTTATCGAA ATTGTGGATG CTCGAAAAAT TCCGAGTACT CCTATGATGA CAATTGCTCT TTCTAAAGAG AATCCTGAAG ATTATGCTTA CGACAGGGAA AAGACAAGAG CCCTTGCCTG GGAAATTGAA GCAACGAAAA TCGATCACAT TGCTGACGTG ACCACTGATC TTTCCCAGAT GAAATTGATA ATTGACCTGC ACGAGAAGGC GATGGAAGGC AGGAACATTA CTATAGATCA GGTAAAAGAA AAGTTCAACG AAGAATTGAA TGTAATGGTT ACCATTTCCC CGGATATAGA TAACCAGATT ATTATTGCCC CGGGAGAACC TTCTTACAGG GAGCTTCTTC AGCTTGCAAA AAGTATCCAT AATGTCACTC TGAAAGGGAT AGAAGGGATC AAGCGTGTGG TAGTTCGTAA GGAAGGGGAA GAATACACAC TATATACTGA AGGTTCGGCC CTGCGTGAAG TGCTTCAGTT CGATGGTGTG GACAAGACAA GAACAAGTAC AAATAATATT AATGAAATTT ATGAAGTGCT TGGGATCGAA GCTGCAAGGA ATGCAATTAT CAAGGAAGCA ACAGACACCC TGCGCGAACA GGGTCTTACT GTGGACATCC GGCATATTAT GCTCGTTTCC GATCTCATGA CCTGTGATGG AGAAGTAAAA CAGATCGGAA GACACGGAAT TTCAGGTGAA AAGGCAAGTG TCTTTGCCCG TGCGGCTTTC GAAGTTACGG TAAATCATCT GCTGGATGCA GGGATGCGCG GTGATGTGGA TCAGCTCCAG GGGGTCACGG AAAATATTAT TGTTGGCCAG CCTATCCGTA TGGGAACTGG AGACGTGCAC CTTATAACCA GAAGAAGAGA GGAAATTGAA GAAGCAGTAG AAGCGGCAGC GGCAGAAGCG GCAGCGGCAG AAGCAGCAGA AGCGGCAGAA GCAGCAGAAG CGGCAGAAGC AGCAGAAGCA GCAGAAGCAG CAGAAGAGTG A
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Protein sequence | MSISESTIDS MIKDLPLPSN ILNTLREDVI KAGVSKKEME EIIEQVMEEY RSSCIEPCDA AGVVAAQSIG EPGTQMTMRT FHYAGVAEIN VTLGLPRLIE IVDARKIPST PMMTIALSKE NPEDYAYDRE KTRALAWEIE ATKIDHIADV TTDLSQMKLI IDLHEKAMEG RNITIDQVKE KFNEELNVMV TISPDIDNQI IIAPGEPSYR ELLQLAKSIH NVTLKGIEGI KRVVVRKEGE EYTLYTEGSA LREVLQFDGV DKTRTSTNNI NEIYEVLGIE AARNAIIKEA TDTLREQGLT VDIRHIMLVS DLMTCDGEVK QIGRHGISGE KASVFARAAF EVTVNHLLDA GMRGDVDQLQ GVTENIIVGQ PIRMGTGDVH LITRRREEIE EAVEAAAAEA AAAEAAEAAE AAEAAEAAEA AEAAEE
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