Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3682 |
Symbol | |
ID | 3624626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4743461 |
End bp | 4744150 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637702514 |
Product | hypothetical protein |
Protein accession | YP_307125 |
Protein GI | 73671110 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.137116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.407633 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTTACA AGAAAATGAA TAAAAAAATA GCTTTTTTGG TATTCTTAAT AGTCGCTCTT GTTGGAATAT TGTTTATTCT CGATACTATT TTAATTGGTC CAGGGTTGCC TCCTTCAGAG GAGATGCCTA GGTGGTATAT CCCTGATACA TATAAAGAAA ATGAGCAGAC ATGTACATTA CTTTTTCCGA AGATTTCTCC TTACTGCAAT ATGGTGAACA TTTCTGATGG AAAATTTATG ATTGTTTGGT ATTTTGACGA TGAATCTGAA TTTTTGAAAG GGGAAGATGC CCTTTATCGA TATTTGGAAG AAAATGGTAG TGTTTTCCAG CAGAAATTAA ATATTAGTAC AGAGCTTCAG GAGAAAATTA AGAGAGATAA AGCTAATAAT ACCTGGGGCC CAACTGTTGG TTCTCATTCT TTTAACGCAA CAGGGTACGA AAGTCCTGAA ACGTCGGGAT ATTTTCTAGT ATATGAGAGA CCTTTTCTTG AAACCAGAGA AGATTATTTC GTAGCTTATT ACGGAATTAT GGGCCTAACG AATCTTACTG AAGAAACACC AGAGCTGAAA AAATTGATTG CAGAATCATA TTATATGTCT AATGAAGAAG GAAATGTTGA TGGCTTAGAA CTATCCGAAA ATAAACCATC TTTTTGGTTC TCTTTCTTCT TATTTTTATT TATTTTTTAG
|
Protein sequence | MFYKKMNKKI AFLVFLIVAL VGILFILDTI LIGPGLPPSE EMPRWYIPDT YKENEQTCTL LFPKISPYCN MVNISDGKFM IVWYFDDESE FLKGEDALYR YLEENGSVFQ QKLNISTELQ EKIKRDKANN TWGPTVGSHS FNATGYESPE TSGYFLVYER PFLETREDYF VAYYGIMGLT NLTEETPELK KLIAESYYMS NEEGNVDGLE LSENKPSFWF SFFLFLFIF
|
| |