Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3646 |
Symbol | |
ID | 3624590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4698099 |
End bp | 4700825 |
Gene Length | 2727 bp |
Protein Length | 908 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637702479 |
Product | hypothetical protein |
Protein accession | YP_307090 |
Protein GI | 73671075 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAATA TTTACATATC ATTAATAGCA TCCTTACTAC TGCTTACATC GGCAGGTGCT GCTTCTGCTG CACTACCATA TTACATAGAT CCTCAACATA ATTTGTGGCT TAATATCAGC ATGGACGGCA GTACACAATA TTTCAATGTA TATAATACGC CTGGATATTC TCCAAATGGA GATGCAGTCA TGTGGGTATA TGATAACTTC AGCTCAAGCA ACTTAGACAC ATCAAAATGG ACTAGTTATA AAAAAGGGAG TAGGAAATCA ACCGTAGACA TACAAAACGG ACAGCTGATA TTGTCAGGTG CAGGCGTGAC CTCCTCTGCA AATGTTGTGC TGAACAAACC TTTCACTAAT GGAATTGAAC TGGCAGTTAA TGAAACAATT TCAAAGGGTA CCAGTGATGT AGGTACATAT TCTGATGCTT CTTTTGGTTC TGGCCCACTT GCAGGTGTGA CTAATGAAGT AGATTTAGAT TTGTGGCACA TATATCTCTA TTGGCTGCAC ACGTTGATCT CTATCTTGAG ACTCGACAAT ATGGTTGATA TTGACAGTAG TTCCGAAACA GGTTGGTGGC ATACGGTTTT CTCCACTACT GATGGCTCAT TCCAAAGTCA GGGAATATCA AGATCAATAA TTTGGGTAAA TTCAAGCACT TCGGATGCTA TTATGCCTAA TCCCGGCATC ACGCTAAGTG AGTACACAGG AGAAAATCTT CCACATACAG TTGCATATAG TTACGACACT TACGGCAATG CAAATATGAG TATGCTCAAT GTAAACCAAA ATCGACTCCC ATTATCTATA CCAGATCCAT ACGGTTGTAA CCAGTTCAAC AATGTAGATA TTTATTATAA TTCGTCTGGA GTATTTGGCC ACAACTGGTG GATGCTTATT ACAACACATT ATATGTATTC AGACCGTAAG TATGAAAATG CATGTTTATA TTATTCTGAT GACGGACTGC TCTGGTATGC ACCGCCAGGA GTAACAAACC CCATAGGAAA GTCGGTTGTA TCTAAATATG ACTCAAATGC TTATGGATCT GATCCTGATC TTGTATATAA CCCTACAACT GGAAAATTCA TGTGCTACTA TGTAATTGAA AACGTTACCG GTAATGAAGA TATAAAAGAT TTGAAAGTTA GGACATATGA TGGAAATACT GTTTCACCTG AAATGAAAGT TATTACACAT GGAATATCAC CAACCGTGTT GTATGATAAC ACAACCGGAA TATTTTATAT GTGGACTGTT GACACCGATT CCAATCCGAA TGTAATATAC AGATACACTT CAACTGACGG AGTAAATTTC AGTAATAAGC AAGCAGTTGG TCAATCAAGC GATTATGAAA CCTGTCATAT AAATATGATG AATCATCCTA AAGACTCAAA GCTCTATGCA CTTTTTACAT TCACAGGCAA TAATAATCTA TATCTTGCAA CCACAAGCAG CTACACAGAT AATTTTACAA TTCAAAAATC ACCCATTCTA CGGGTTGATG ACTCTTCATC TGCCACGCAT AAGAATATTG AGTTATCTTG CAGTGCAGGT ATATTTAGTA ATGACGGAAA CATTCTGAAA CTATGGATAA CTGCTAAAGA TATCAATGGC GTTTGGACTG CTTTTTACAC ACAAGCAACT CAGGCAAATG GTATCTGGAA AGTTGGAAAT TTCACAACCC TGCATGCTCC TGTTATGACA GTCAAAAATG AAAAGTGTCT CAATACCTCA AAACAGTGGA TGCTCTCACA GGGCGACTAC GTAAATAACA AAGGAGTCAT AAGGAAAATC AACGAAATTT GGGGATACAA AATAGGTCAC ACACCAAAAG TAAAAGTAAC GAATATGGGA ACATACATGC AAATTGAAGT TGTGCCAACT GACTCTCGGA CTGTGACTGA TTACCAGGTG ATGATCCCTG CTAGTTTTCT GGACTTACCG CACCAAAATG AATCTCTGGA TATTGAACGC GTGCCAAATG ACTCCGAGAA CGTAACTGAT ACTCATGTGA TGGCTCCTGC TAGTCTTCTG AACTTATCAT CCCAAAGTGA TTCTCAGGAT AGCGAACGTG TTCAGTCAGG AACGGCCACA TACCCTTCAA AAGGAGTAAT TAATTGGAAA AGACAAAACT GGTATTTGAC AGGTGGCAAA GCAAATCCTG GTAATAATTA CTGGAATATT TCAGGTGCAT GGATAGATAA CCAGGATAGG ATGCACTTAA CAATTGTAAA AAACAACAGT ATATGGGAAT GCACAATGTT AAGCAGCCAA AATACATATC ATTATGGTAC TTTTACGTGG ACTGTAGCTT CACCTGTTTA CACATTTGAC AAAAACAGTG CAATAGGACT TTGTACTTAT TTAGATGATA ATAATGCATC AACTGTAGGA ATTTCAAGAT GGGGTGACCA TAATGGAAAT CAACTATGGT ATTCCATAGA ACCTTCTAAA ATAAAAGGAA ATAGTAAGGC ATATCTAGTT CCATCGAGTA TCAAAGGCAC AAACACGACT TATAGAATTG AGTGGAAACC CAATTATATA AGACTTACAT CCATGCAGGC AGATGGAACA ATAATAGCAG ACTATAACAA TACAAACATT TCTGCCATCC CACAAGAGCC TGAAAGTGTC ATAATGAATT TATGGCTAAT GGCTCCTCCA TCTAATGGAA AAAACATTGA ACTTATAATT AGTAACTTCA CAGTTACTAA CGATTGA
|
Protein sequence | MKNIYISLIA SLLLLTSAGA ASAALPYYID PQHNLWLNIS MDGSTQYFNV YNTPGYSPNG DAVMWVYDNF SSSNLDTSKW TSYKKGSRKS TVDIQNGQLI LSGAGVTSSA NVVLNKPFTN GIELAVNETI SKGTSDVGTY SDASFGSGPL AGVTNEVDLD LWHIYLYWLH TLISILRLDN MVDIDSSSET GWWHTVFSTT DGSFQSQGIS RSIIWVNSST SDAIMPNPGI TLSEYTGENL PHTVAYSYDT YGNANMSMLN VNQNRLPLSI PDPYGCNQFN NVDIYYNSSG VFGHNWWMLI TTHYMYSDRK YENACLYYSD DGLLWYAPPG VTNPIGKSVV SKYDSNAYGS DPDLVYNPTT GKFMCYYVIE NVTGNEDIKD LKVRTYDGNT VSPEMKVITH GISPTVLYDN TTGIFYMWTV DTDSNPNVIY RYTSTDGVNF SNKQAVGQSS DYETCHINMM NHPKDSKLYA LFTFTGNNNL YLATTSSYTD NFTIQKSPIL RVDDSSSATH KNIELSCSAG IFSNDGNILK LWITAKDING VWTAFYTQAT QANGIWKVGN FTTLHAPVMT VKNEKCLNTS KQWMLSQGDY VNNKGVIRKI NEIWGYKIGH TPKVKVTNMG TYMQIEVVPT DSRTVTDYQV MIPASFLDLP HQNESLDIER VPNDSENVTD THVMAPASLL NLSSQSDSQD SERVQSGTAT YPSKGVINWK RQNWYLTGGK ANPGNNYWNI SGAWIDNQDR MHLTIVKNNS IWECTMLSSQ NTYHYGTFTW TVASPVYTFD KNSAIGLCTY LDDNNASTVG ISRWGDHNGN QLWYSIEPSK IKGNSKAYLV PSSIKGTNTT YRIEWKPNYI RLTSMQADGT IIADYNNTNI SAIPQEPESV IMNLWLMAPP SNGKNIELII SNFTVTND
|
| |