Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3530 |
Symbol | |
ID | 3627552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4525964 |
End bp | 4527274 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637702356 |
Product | PmbA/TldD family protein |
Protein accession | YP_306979 |
Protein GI | 73670964 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.314475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGAGC TTGCAAGAAA AGCCCTAAGG CTTGCAGAAA AGGCAGGGGC TGAAGAAGCT GAAATCTATT ACGCTGCAAA TCACTCAACA GGTGTGAATT TTAGAAAAGA CGCCCTTGAG AATGCTAAAG ACCGTTTTTC AGAAGGCATA GGAATCAGGG CAATAGTAAA CGGAGCCGTG GGCTTTGCCA GCACAAATTC GGCAGCACAA GTCGAAAATG CTGTTGAGGT TGCAGTTGCC GAAGCTAGGG TCAGGGAAAG CGACCCTGAT TGGATAAGTC TTCCTTCTAA CGGGAAATAT CCCACTGTCT CGGGCATCTT CGATAAAAAA GTCGATACTC TTGAACTTGA ATCCTGTATT GAGCATGCCC TGGCACTTAT TGACGGCACA AAAGAAGTCC CAGGCACGCT TCCAACATCA GGAGGTTTTA CTCGGTCAAA GGGCAAGCAA CTTATCCTGA ACACAAATGG CATAGAAATC GAAGAGGAAT CAACAGCAAT TTCCGGTTTT GTGGATGTCA TTACTGTAAA TGGGCAGGCT TCAACAGCCT ATGACTTCGG GATTTCTCGT TCTTTAGATA TTGATTTCTT TGCCCTCGGA AAGAATGCAG CCGAGCTTGC ACTGAAGTCC AATGGCGGAA TAAAGGTCGA ACCCCAAAAG ACTGATGTGA TCTTCCATCC GTTTGCCATT GCAGACATTA TTGAAGAAGC GCTTTCCCCT TCATTTGATG CGGATAATGT CCAGAAGGGA AGGTCAGGCC TGATAGACAA ACTGGGAGAA GAATTGGCAG TGCCAGAACT CAGTATCTAC GATGACGGGC TCATTGAAGC AGGAATCGAA ACATCGGCTT CGGATGACGA GGGAGTTCCT TCTCAGCGCA CCACCTTGAT TGGAAAAGGT GTGCTTGAAA CTTATCTTTA TGACAGTTAT ACTGCAGGAA AAGCAGGCGT AAAGAGTACA GGAAATAGTT CAAGGTCTTC TTACACAAGC CCTCCTTCAG TGGGGCTCAG GAATGTTATC GTTGATTATC CTCAGACAGA TGTTATTGCT GATACGCAGT CCGGGATCTT CGTAAACACA GTAATCGGCG CCCACACGGC AAACTCGATT TCAGGAGATT TCTCCATAGA AGCCAGAAAT GCCTTCACAA TTAAAGACGG AGCACTTGAC AAACCTATAA AATCCCTCAT GATTTCGGGT AATGCTTTCG AGCTCTTAAA ACAGATCACA GGGGCAGGCT TTGATGTCAG GAAAGTCGGA GGAATAATTA CACCTTCAAT CCGTGTTGCA GATATGAGTG TTATAGGGTG A
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Protein sequence | MYELARKALR LAEKAGAEEA EIYYAANHST GVNFRKDALE NAKDRFSEGI GIRAIVNGAV GFASTNSAAQ VENAVEVAVA EARVRESDPD WISLPSNGKY PTVSGIFDKK VDTLELESCI EHALALIDGT KEVPGTLPTS GGFTRSKGKQ LILNTNGIEI EEESTAISGF VDVITVNGQA STAYDFGISR SLDIDFFALG KNAAELALKS NGGIKVEPQK TDVIFHPFAI ADIIEEALSP SFDADNVQKG RSGLIDKLGE ELAVPELSIY DDGLIEAGIE TSASDDEGVP SQRTTLIGKG VLETYLYDSY TAGKAGVKST GNSSRSSYTS PPSVGLRNVI VDYPQTDVIA DTQSGIFVNT VIGAHTANSI SGDFSIEARN AFTIKDGALD KPIKSLMISG NAFELLKQIT GAGFDVRKVG GIITPSIRVA DMSVIG
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