Gene Mbar_A3456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3456 
Symbol 
ID3626429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4431920 
End bp4432762 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content45% 
IMG OID637702285 
Productcobalamin-5'-phosphate synthase 
Protein accessionYP_306909 
Protein GI73670894 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0368] Cobalamin-5-phosphate synthase 
TIGRFAM ID[TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.78149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.171935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCAT ATTTGCTTGC TTTTAAATCT GGGTTTGGCT TCCTGTCCAC CATCCCTGTG 
GGAATCAGCA TGGAAGGAAT CGACGAACTC ATGAAGAAAA TCTACTTTTA TCCCGTAGTG
GGAGCCGTAC TCGGGCTTCT CATAGGGGCA GTTGCATTCA TAGGGCAGGT AATATTTCCT
GGTCCTGTGC TTGCAGCCCT TCTAATGGGA TTCATATATT ATATTACAGG TTTTAATCAC
CTTGATGGTA TCACGGATAT CGGGGACGGT TTTATGGCCC ACGGGTCACT TGAGAAAAAA
ATCAAGGCCC TGAAAGACAC GACCATCGGG ACAGGAGGCG TGTCCTTCTG TATTCTCTTA
TTACTTACTC TGTATGGTTC GATAAGGGCA GTACAGCAAG AAGGTTCCGC CGTTTTTGGG
TCTAACCTTC CGGTTTTAAT GTTTGAATCA ATGTTTATTG CAGAGGTCAG TGCAAAACAG
TCCATGCTAA CTATTGCTGC CTTTGGAAAG CCCATACCTC CACGGGAAAA ACAGGCTTAT
CCTGGCTTGG GAGCTATGAC TATAAACGGA GCAACCAGAA AGAACTTTCT GATTGGATTT
GTATTCGGAG CCATCGTTTG CTTTCTGCCT TTTGGGTGGA TAGGACTGTT GCCTTATCTG
GGAGCCTGCC TGGTGGCTCT GGTGATTCTT AACCGAAGCT ATGCTCATTT CGGAGGATTA
AATGGCGACG GAATTGGTAC TGCTAACGAA ATTGGTCGGG TAACTGCACT CATAATTCTC
GCAGTTCTCC TGCAACTTTC ATTAAACGGA TACATGGGAG GTTTTAAATG GACGCTATTG
TAA
 
Protein sequence
MNSYLLAFKS GFGFLSTIPV GISMEGIDEL MKKIYFYPVV GAVLGLLIGA VAFIGQVIFP 
GPVLAALLMG FIYYITGFNH LDGITDIGDG FMAHGSLEKK IKALKDTTIG TGGVSFCILL
LLTLYGSIRA VQQEGSAVFG SNLPVLMFES MFIAEVSAKQ SMLTIAAFGK PIPPREKQAY
PGLGAMTING ATRKNFLIGF VFGAIVCFLP FGWIGLLPYL GACLVALVIL NRSYAHFGGL
NGDGIGTANE IGRVTALIIL AVLLQLSLNG YMGGFKWTLL