| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3367 |
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| Symbol | |
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| ID | 3625675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4322109 |
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| End bp | 4323782 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637702195 |
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| Product | hypothetical protein |
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| Protein accession | YP_306820 |
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| Protein GI | 73670805 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000828737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.010386 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAAA CAAATATAAT AATTATATTT TTATTATTAT TTGCTACAAA TATAGCATCA
GCAAACTCGA CATCGGAAGA TCTAAGTCTT AATGTCACAC AGATTGATGA AATTCTCCAG
ATAGAAGATG GATTCGTAGT AACATCAACA GAATGGAGTC CTGATGGACA GTATTTGCTT
GTAACCTGTT CCAAAATGAA TTCACCTTTA AATTATATCG TTAAGCATTA CTTATTAGAT
ACGAATTCTC ACACTTTCGG AGAAATAAAT TATGGAATTA ATGGGTCTGA TACCAACGGA
ATATTGCAAG CAAAATGGAC CCCATCAGGT GACAAGATAT ATTTCGGAGT TTCAAGGATT
GAAGAAACAA ATTCTGGTCA TTGTTATATC ATTTGCAATC CTGATGGCAC GAATTTGAGG
TGTATTGGGA CCAATTATAC TGATCTTTCA TACATAATAA AGAATCTTGG GAGTATTGGT
TTTCAGAGGA ATCTTAACTG GAATCAAGAT TCCAATAAAA TCGTATTTGA ATGGGAAAAA
CCAGGAAATC ACTCTCCTGG AGTATATATA GCAGATGGAA AGGGGACAAT TATCAGCGAA
CTTCTATCAG CAACGTATCC ACAGCCTGCC TTGTACGACT CTGATAAAGT CTTTATTGTT
AAAGATGAAG GAACTGTAGT GCTTGCCAAT GATGAAGGCG ATTTGATTCA GACGTTTCAA
CCTGAGAACA AAGATGAACG ATACTGCGCT TTTTCACTTA GCCCTGACAG AAAAAAAATC
ATGTTTGCAG CAGGGTCATC AGACAGCTAC AATTTACAGA CATACGTCTC TAATATTGAT
GGTTCGAATT TAAAAGGAAA TATCTCTTAT AATGAAAATC TCTGGGCAAA CGAATCCTGG
CAGCCAAACG GTTCTCTTCT TCTGGTAAAT CAGAACAGAA ATCTGTATAT TGTTGAAGGA
GACGAAAATA ATAAGCGTCT TTTATATAAA GGCAATGCCA GCGAATCCCA GTGGTTCCCA
GATGGGAAGA AAATTCTTTT TGTTGAAAAT GGAAACAAGC TGTATTCAAT CGATATTGAT
GGAACCAATA TAACTTTTAT CACTAATTTC GGACAGACTT CATCCAATAC ATGGAAATAT
TTTGATGGAG GTCAGCACTT TTCAATAAGT CCATCAGGAA AAATCATAGC TTTTATGTCT
GCTTTTGACT CAGCCACTGG AAAAGCTATT GAAAACTATA ATATTGTTAA TCTTAATATT
GCTGCTCCTT TGTTCATTGT TAATTCCGAG GGCTCGAATC TCACTCAGGT GACGCCTGCA
GTAAAGGGAA GATACGATAC ATGCATAAAC TGGAGCCCTG ATGGAAAGCA ATTCACAATC
GGGTCCACTA TATATATGGA TCCAGGGTGG AACCATGTGA ATAACTCTCT AGTAATATTG
GATTCTGAAA ACTCTTCGTC AATCTGGAAG AGGTTGCCTG TAAAGGAAAT TATCAAGAGC
GAAGAATCTG GTACCGTTGA TAAAGTCCAG ATCAATGAAC CAGATTCCAT CAACACGTCG
TCGCAAGTTG TCGAGAATAA GAAAACAAGC AGTCAATCTC CTTCCTTTAC GTTTTTGCAA
TTGTTTATCT GTCTAATGGG GATCTGGTTA TTGCATAAAA GTAAGGAGTT GTGA
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| Protein sequence | MLKTNIIIIF LLLFATNIAS ANSTSEDLSL NVTQIDEILQ IEDGFVVTST EWSPDGQYLL
VTCSKMNSPL NYIVKHYLLD TNSHTFGEIN YGINGSDTNG ILQAKWTPSG DKIYFGVSRI
EETNSGHCYI ICNPDGTNLR CIGTNYTDLS YIIKNLGSIG FQRNLNWNQD SNKIVFEWEK
PGNHSPGVYI ADGKGTIISE LLSATYPQPA LYDSDKVFIV KDEGTVVLAN DEGDLIQTFQ
PENKDERYCA FSLSPDRKKI MFAAGSSDSY NLQTYVSNID GSNLKGNISY NENLWANESW
QPNGSLLLVN QNRNLYIVEG DENNKRLLYK GNASESQWFP DGKKILFVEN GNKLYSIDID
GTNITFITNF GQTSSNTWKY FDGGQHFSIS PSGKIIAFMS AFDSATGKAI ENYNIVNLNI
AAPLFIVNSE GSNLTQVTPA VKGRYDTCIN WSPDGKQFTI GSTIYMDPGW NHVNNSLVIL
DSENSSSIWK RLPVKEIIKS EESGTVDKVQ INEPDSINTS SQVVENKKTS SQSPSFTFLQ
LFICLMGIWL LHKSKEL
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