Gene Mbar_A3314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3314 
Symbol 
ID3626808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4256256 
End bp4257617 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content43% 
IMG OID637702149 
Producthypothetical protein 
Protein accessionYP_306774 
Protein GI73670759 
COG category[S] Function unknown 
COG ID[COG2512] Uncharacterized membrane-associated protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0908222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTAA GGCTCTATTT TATTTGTATT GCTACTGTAC TTGCTTTAGT TGGACCTGCC 
TTAGCGGACA GCACGTCCAC AGTACATGGG TCGGTGTACG GTTGGGACAC CTTCGAGCCT
CTGGAAAATG CCGTGGTGGA AGTAAACTCC ACTCCTTCAC AGTCTATGGT GGCAAAATAT
GGCCTGTATT CTTTTGACCT GGTACCTGGA GATTATAAAA TTACAGCCAG GTACTATCAA
AATAGCACCC TAACTTATTC AGCAGAAGAG ACTATTAAGA TTGAAAATCA AGGAAATTAT
GTACTCGACC TCCTGCTTCT TCCAGTTTAT TCCGATGAAC TTATGGACAG TTCCGGAGTA
AACGAATTTT CCGAAAACGC GAACAGAACC ACAGGAAACT TATCCTCGAA TACAACAAAT
TTGCTAACAA AGACATCCAC AGATTCGACA GCAAGCAAGA ATAATTCGAG TAACATAAAT
TTAGTCGACC AGAGCGGAAT TGGCCCTATA AATGTGAACT ACCTGCTGGT AACTCTTTCA
CTTATCCTCC TGCTTGCAGC AGGCTACCTG ATCTCCAGAA AGGATAAAAA AATAGAAAAA
GTAGAGAAAA ATCAGCCTTT AAAAAAGGTA CATAGAATCT CAGGTACAGA AGCAGTTGGA
AAGGGGCATT CTACAGGAGA CTTATTCAAA CCAGTTAAGG TGTCCGAACT CTCAGTAGAA
GTCCATGACG AAAGGGTAGA AGTTCCTAAC GAAAGCTTAG AGCCCGCGCT GAAATCTCAG
GTACAGGAAT CTCAGATAAA GCCTTTCGAA ACTGCATCTT CAACAGAATC AGTAGCAGAT
CCTGTCGAAG AACCTGTGAG AGAGACGGTA CATAAATCTC TGCAAGAACC TGTAAAAGAA
TCAATAAAAG AACCTGCGAA TAAACAGGTA AAACCGGCAG TGACAGAATT ATCAACTGAA
ATCCCGAAAG AGAAAGTTCA GGAAGACTTT GAAGAAATTA AAGTGGACTC TCAAGAGAAT
AAAGTGGACT CTCAGGAGAA AGAAAGAAAA CTGGTTGAAT CTGAGCCTCA GAAAGAAAAA
CAGGGAACTT CCTCTGAAGC TGAAGATCAG TCCGCAGAGA GTCCTGAAAC TGAAACTCCT
GCTTCCAAGA AAAAGCTCCC GCTTCCCGCT GACCTCCAGG AGGTCATGGA TATAATTCGA
GGCCAGGGAG GTAGGATTAC ACAGAAAGAC TTGCGAAGCA AGCTGAAGTA TTCCGAAGGA
AAGGTTAGCC TCATGCTTGC AGACCTGGAA AGAAGAGAAT TGATTGAGAA ATTCAAGCGG
GGTCGTGGGA ACGTTGTTAT CCTGAGAGAT GAAGAACGCT GA
 
Protein sequence
MNLRLYFICI ATVLALVGPA LADSTSTVHG SVYGWDTFEP LENAVVEVNS TPSQSMVAKY 
GLYSFDLVPG DYKITARYYQ NSTLTYSAEE TIKIENQGNY VLDLLLLPVY SDELMDSSGV
NEFSENANRT TGNLSSNTTN LLTKTSTDST ASKNNSSNIN LVDQSGIGPI NVNYLLVTLS
LILLLAAGYL ISRKDKKIEK VEKNQPLKKV HRISGTEAVG KGHSTGDLFK PVKVSELSVE
VHDERVEVPN ESLEPALKSQ VQESQIKPFE TASSTESVAD PVEEPVRETV HKSLQEPVKE
SIKEPANKQV KPAVTELSTE IPKEKVQEDF EEIKVDSQEN KVDSQEKERK LVESEPQKEK
QGTSSEAEDQ SAESPETETP ASKKKLPLPA DLQEVMDIIR GQGGRITQKD LRSKLKYSEG
KVSLMLADLE RRELIEKFKR GRGNVVILRD EER