Gene Mbar_A3221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3221 
Symbol 
ID3627338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4137768 
End bp4138505 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content42% 
IMG OID637702058 
ProductArsR family transcriptional regulator 
Protein accessionYP_306683 
Protein GI73670668 
COG category[R] General function prediction only 
COG ID[COG1719] Predicted hydrocarbon binding protein (contains V4R domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0279242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAC CTGAGACTAA AACAGAATTT TTTTACAATG ACAAGGGACT GGTAGCAATA 
GGCAGTCCTG TTAAACTCCA GATCCTTAAT TTGCTCAGGG AAGAACCCAG GTCGTTTGAT
GAAATCGTAA AATTTACAGC AAAAGCCAAA TCAACTATTT CCGTACACCT TAACAATCTA
AGGTCATGCG AGCTTGTGGA AGAAAACTTT GACCCAGGAG ATCGCCGCCG AAAGATTTAT
TATCTCACTT CCCGCTACAT GGGCTGTTCT CAGGAGCCTT TTATTGAGAA TTACAGAAGT
TTACTGGACA AGGTTCCTTC ATGCGGAAAC GACAGGTTCT GTTTCACAGA AATCCTGCTC
CATGCGCTTT ACTTTGGCTT TGAAGCATAT GGGATTGATA ATACCCCTGT TGTAAAAATG
ATAGGAAACG ATCTAGGAAG GTCTATTTCT CCCATTTTTG AATCCGAAAC GCCTGAAGAA
CTCCTGAGGG AAATCGGGAA TTTTCTGGAA TTCCAGGGGA AATGCAGGGT TACCGTACTT
GTGGACATCC CTGCTCTCCA GGTTGAAGAT AATTTCAAAG CCAGATCAAT ACCTGTAATC
GGAAAACCCT TTTGCACCTT AACAGAAGGC ATTATTGAAG GAATTCTTAA CGGAAAGCTC
GAGAAGGAGT ACAGAGTTAC CGAAACCGAA TGTTACGGAT CAGGGCATGA ACACTGCCTT
TTTAAGATAA CAATATAA
 
Protein sequence
MAKPETKTEF FYNDKGLVAI GSPVKLQILN LLREEPRSFD EIVKFTAKAK STISVHLNNL 
RSCELVEENF DPGDRRRKIY YLTSRYMGCS QEPFIENYRS LLDKVPSCGN DRFCFTEILL
HALYFGFEAY GIDNTPVVKM IGNDLGRSIS PIFESETPEE LLREIGNFLE FQGKCRVTVL
VDIPALQVED NFKARSIPVI GKPFCTLTEG IIEGILNGKL EKEYRVTETE CYGSGHEHCL
FKITI