Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3221 |
Symbol | |
ID | 3627338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4137768 |
End bp | 4138505 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637702058 |
Product | ArsR family transcriptional regulator |
Protein accession | YP_306683 |
Protein GI | 73670668 |
COG category | [R] General function prediction only |
COG ID | [COG1719] Predicted hydrocarbon binding protein (contains V4R domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0279242 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAC CTGAGACTAA AACAGAATTT TTTTACAATG ACAAGGGACT GGTAGCAATA GGCAGTCCTG TTAAACTCCA GATCCTTAAT TTGCTCAGGG AAGAACCCAG GTCGTTTGAT GAAATCGTAA AATTTACAGC AAAAGCCAAA TCAACTATTT CCGTACACCT TAACAATCTA AGGTCATGCG AGCTTGTGGA AGAAAACTTT GACCCAGGAG ATCGCCGCCG AAAGATTTAT TATCTCACTT CCCGCTACAT GGGCTGTTCT CAGGAGCCTT TTATTGAGAA TTACAGAAGT TTACTGGACA AGGTTCCTTC ATGCGGAAAC GACAGGTTCT GTTTCACAGA AATCCTGCTC CATGCGCTTT ACTTTGGCTT TGAAGCATAT GGGATTGATA ATACCCCTGT TGTAAAAATG ATAGGAAACG ATCTAGGAAG GTCTATTTCT CCCATTTTTG AATCCGAAAC GCCTGAAGAA CTCCTGAGGG AAATCGGGAA TTTTCTGGAA TTCCAGGGGA AATGCAGGGT TACCGTACTT GTGGACATCC CTGCTCTCCA GGTTGAAGAT AATTTCAAAG CCAGATCAAT ACCTGTAATC GGAAAACCCT TTTGCACCTT AACAGAAGGC ATTATTGAAG GAATTCTTAA CGGAAAGCTC GAGAAGGAGT ACAGAGTTAC CGAAACCGAA TGTTACGGAT CAGGGCATGA ACACTGCCTT TTTAAGATAA CAATATAA
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Protein sequence | MAKPETKTEF FYNDKGLVAI GSPVKLQILN LLREEPRSFD EIVKFTAKAK STISVHLNNL RSCELVEENF DPGDRRRKIY YLTSRYMGCS QEPFIENYRS LLDKVPSCGN DRFCFTEILL HALYFGFEAY GIDNTPVVKM IGNDLGRSIS PIFESETPEE LLREIGNFLE FQGKCRVTVL VDIPALQVED NFKARSIPVI GKPFCTLTEG IIEGILNGKL EKEYRVTETE CYGSGHEHCL FKITI
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