Gene Mbar_A3214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3214 
Symbol 
ID3627117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4131606 
End bp4132235 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content41% 
IMG OID637702051 
Producthypothetical protein 
Protein accessionYP_306676 
Protein GI73670661 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5549] Predicted Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.296344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0548753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTAACGG CACTTATTTT GCCCATTACC CCGGCAGCTT CTGAGTTTAA TTATCCAAGA 
ATTTTAGATC ACCCATGGGA TCATTCTCCT ATCACCGTGT ATATAGACAA CAAAAGTGTT
CCTCCACATT ATAGTCCTAC TTATTACACA CAGGTACAAA AATCTCTGAA TTACTGGGAA
GAAGGAGGAA ATGGAAAACT GGACTATACC CCTGTTTTTA AAATCGTAGA TTCCGAAAAA
GCTGATATCA GGATAAGATG GGTCGAAGAC CTGCAGAAAG AACAGGGTGT CCCTTCTGGA
GTTGCAGGTG ATGCCATTCC ATATAGTGTC AATGGACGAT TTATACGCGT AGATATAACG
CTTGGAGTTG GATTTTCTCA ATGGGGAGAG TGGGTCCCAT ATACTGATAC TGCAATGTTC
GCCATTGCAA AACATGAATT GGGGCATGCC CTGGGGTTGG ATCACAGTAA TGACAAGCAA
GATATTATGT ATCCGACAAA CGAGCAGATA AATAACACAA ATTCTATCCT GAGTAAGTAC
GGTTCACTTT TGCTTTTTGT AATTTACGCC ATTCTTGCTA TTGCCGTCTT CCTCTCTGTA
AGCTACATAT TAGGACGCAT TGCTAAATAA
 
Protein sequence
MLTALILPIT PAASEFNYPR ILDHPWDHSP ITVYIDNKSV PPHYSPTYYT QVQKSLNYWE 
EGGNGKLDYT PVFKIVDSEK ADIRIRWVED LQKEQGVPSG VAGDAIPYSV NGRFIRVDIT
LGVGFSQWGE WVPYTDTAMF AIAKHELGHA LGLDHSNDKQ DIMYPTNEQI NNTNSILSKY
GSLLLFVIYA ILAIAVFLSV SYILGRIAK