Gene Mbar_A3092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3092 
Symbol 
ID3625223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3978182 
End bp3978655 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content38% 
IMG OID637701929 
Productmultiple antibiotic resistance protein 
Protein accessionYP_306559 
Protein GI73670544 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.26286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0480998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCTTTT TTGCAGTAAC CAGCAACATA ATACTTGAAC TGTTCAGCAT TAGTGTGGAT 
TCATTGAGGG TTGTAGGAGA GATATTGCTT TTTAGCATTG CCTTTGATAT GATGCATGCC
AAAATCTCAA GAGAAAGCAT TACTGAAGAA GATATTTCGC AGTCCCAGGA ACGTGAAGAT
ATCTGGGTAT TTCCCATAGG TCTGCCTCTT CTTATAGGCC CAGGTGAAAT TAGCACGGTA
ATTGTCCTGA TGGGAAGTAC AGAAAACATT GAGCATAAAA TAATAATCCT CATATCAATC
ATATTTACTT TCATTCTCTG CCTGTACATC TTCCTCTTAT CAAGAAGAAT CCATAAATTC
ATAGGATATA ATGGAATGCT GGTCTTTACA AAGCTCATGG GACTTCTGCT TGCAGCGCTT
GCAGTAAACC TTACCTCAGC AGGTTTAAAA AACATATTTA GTTTAACGAA ATAA
 
Protein sequence
MPFFAVTSNI ILELFSISVD SLRVVGEILL FSIAFDMMHA KISRESITEE DISQSQERED 
IWVFPIGLPL LIGPGEISTV IVLMGSTENI EHKIIILISI IFTFILCLYI FLLSRRIHKF
IGYNGMLVFT KLMGLLLAAL AVNLTSAGLK NIFSLTK