Gene Mbar_A3067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3067 
Symbol 
ID3625078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3946444 
End bp3947508 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content42% 
IMG OID637701907 
Producthypothetical protein 
Protein accessionYP_306537 
Protein GI73670522 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0722131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.551545 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAA ATAGAATCTC GGTACCTGCT GAGATTTTAG TGTACAGTAC TTTTGCTGTT 
ATCCTGACAA TAGGAATGAG GGAAATATCT TCCATACTCA CAACCGTATT TTTCTCCATC
TTCGTCGCAC TGATACTTAC CCCATCTGTC CGCTGGTTCA AGCGAAAAGG CATTCCCGGA
ATACTGAGCA TGCTTCTGGT AATTTTGTTA TTAACCCTAA TTATCTCGCT TTTCGGGGTA
GTGATTGTAG GAGCTGCAAT CCAGATTGGA AACCAACTTC CAAACTATCA GAGTCAGTTG
ACAGAAATCC TGGATGAACT TTTACCATAT CTTCCATCCA CCGAAGATCT ATCCCTGCAG
TCCGTTTTTC GTGGTATTAC ATCACTTGCA ATCAGCCTTA CGGTAAGCGT CCTTAATGGA
CTCATAAATG CCGGGACAAC AGTTGGAATA ATCATAGTCA CAGCAGCATT TTTGCTGCTG
GGTGCTGCCG GAGCTCAGGA AAAAAAAGAA CAAAAAGCTG AAGAACAGCT CGTAATCGAA
TCACGTCTGA ATAAATTTGG TAAGGGCCTG ATAGAGTTTA TTGTTATAAG AACAGAAGTA
AATCTTGTTA CGGCCATTGG AATTGCAGTT ATTCTCCTTA TAGGAGGTAT CGACTTTGCG
GTTTTTTGGG GCATCCTGGC ATTTTTTCTA GGTTATATTC CCTACATAGG CCTGGCTTTA
ACCACAATTC CACCTGCATT CTTCGGGCTG CTTCAATATG GGTTTGTAGG GGCTCTGGCT
GTTATTATTG CTATCTCGAT AGTAAATGCA CTCACTGAAA ACGTAATCTT TCCTTCACTC
GCAGGAAAAG GCCTGAAACT ATCTCCAGCT ATTGTATTTC TATCTCTTCT CTACTGGAAT
TATGTGCTTG GAGCTACAGG AATGCTGCTT GCCACGCCTC TTACCATGGT TTTGAAGATT
ATCCTGGATA GTTTTGATGA AACCAGATGG CTTGCCAGAT TGATGGGCCC AGTCGGAAAT
GACACCGAAG ACAAGGAAAT TGCAGGGCAG GAAGAAGGAA ATTAA
 
Protein sequence
MKINRISVPA EILVYSTFAV ILTIGMREIS SILTTVFFSI FVALILTPSV RWFKRKGIPG 
ILSMLLVILL LTLIISLFGV VIVGAAIQIG NQLPNYQSQL TEILDELLPY LPSTEDLSLQ
SVFRGITSLA ISLTVSVLNG LINAGTTVGI IIVTAAFLLL GAAGAQEKKE QKAEEQLVIE
SRLNKFGKGL IEFIVIRTEV NLVTAIGIAV ILLIGGIDFA VFWGILAFFL GYIPYIGLAL
TTIPPAFFGL LQYGFVGALA VIIAISIVNA LTENVIFPSL AGKGLKLSPA IVFLSLLYWN
YVLGATGMLL ATPLTMVLKI ILDSFDETRW LARLMGPVGN DTEDKEIAGQ EEGN