Gene Mbar_A2983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2983 
Symbol 
ID3626626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3841568 
End bp3842632 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content41% 
IMG OID637701828 
Productmagnesium and cobalt transport protein CorA 
Protein accessionYP_306458 
Protein GI73670443 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.23033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.025318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCTT CTGGAAGAAG AGGATCACAA ATTGGGCTTG CACCTGGAGC GCTTGTCCAT 
GTAGGAGAAA AGAAGGTAGA AAAGGTAGTA ATCCGGGTCC TGGCCTATAA CAGTGAAACG
CTTATAGAAA GACAACTGGA GAAGGTTGAA GAGTGTCTGG AATTTAAAGA CCAGCCCGAT
CTCAATTTAT GGATAGATGT GGATGGGCTG GATAGGGTAG ATATCATAGG AAAGCTCGGA
AGCTATTTCA ATATCCATCC TCTTACCCTT GAAGACATAC TCAATACACG ACAGCGGCCC
AAGACTGAAG ATTACGACTC ATATATTTAT TCGGTTTTAA AAATGATTCT CCTTGATAAG
GAAAATAAAG AGATCACTAT AGACCAGGTA AGCATTATCA TTGGCTCTAA TTATGTCCTC
TCTTTTCAGG AAAGGGATGG GAACGTTTTT GACCAGATGC GGGAAAGGTT TGAAAATCCG
GCGTCTCGCC TGCGGAAAAG CGGGGTGGAT TATCTTGCCT ACGGCCTGAT TGATACTGTT
ATCGATAACT ATTTTTTAAT CCTTGAGCAT TTTGGTGATA AAATCGAATA CCTTGAAGAA
GGGCTGGTAT TACATCCAAG GCCTGAGACC CTTAGAACTA TTCAAAAGTA TAAAAGGGAT
ATGATTACCC TTCGTAAATC TATCTGGCCT CTTCGGGAGC TAATAAATGG TTTGCAGAGG
GTTGAGTCCG ATCTTATTAA AGAGACTACT CGAATTTACC TTAGAGATGT TTATGACCAT
ACCATTCAGG TAATAGATAC CGTCGAAGAT TTCCGGGATA TTTTATCTTC AATGGTTGAT
ATCTATCTCT CCAGCATAAG CTTCAGGATG AACGAAGTTA TGGAGGTCCT GACGGTTATA
GCAACAATTT TCATTCCCCT TACTTTCATA TCAGGCGTTT ACGGAATGAA TTTCAAATAC
ATGCCTGAAC TCAACTGGCG CTGGGGCTAT CCGACAGTAA TGTTTGCAAT GATCCTTCTA
GCAGTCAGCA TGTTTATCTA TTTTAAGAAA AGGAAATGGG TTTGA
 
Protein sequence
MAASGRRGSQ IGLAPGALVH VGEKKVEKVV IRVLAYNSET LIERQLEKVE ECLEFKDQPD 
LNLWIDVDGL DRVDIIGKLG SYFNIHPLTL EDILNTRQRP KTEDYDSYIY SVLKMILLDK
ENKEITIDQV SIIIGSNYVL SFQERDGNVF DQMRERFENP ASRLRKSGVD YLAYGLIDTV
IDNYFLILEH FGDKIEYLEE GLVLHPRPET LRTIQKYKRD MITLRKSIWP LRELINGLQR
VESDLIKETT RIYLRDVYDH TIQVIDTVED FRDILSSMVD IYLSSISFRM NEVMEVLTVI
ATIFIPLTFI SGVYGMNFKY MPELNWRWGY PTVMFAMILL AVSMFIYFKK RKWV