Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2974 |
Symbol | |
ID | 3625893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3824308 |
End bp | 3824919 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637701819 |
Product | hypothetical protein |
Protein accession | YP_306449 |
Protein GI | 73670434 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00851902 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.671104 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCAA AGAGGAACGG TGAAACCTTG AAAGCTCTGG TTATTATAGA TATGACTAAC GATTTCGTAT ATGAGACCTA CGAACATGAA GGAACGTTAT ATGAGGGAAA ACTTGTAGCC CCTATGGCAA AGGCAATTGT TGACAAAATA GCCAGGCTAA TAATAAAGGT AGTAAAAGGG GGGACAGTCA GTGTTATCAG GATTCCGAAA GATCACCTAA ACGCCTTTAT GAACCCCGAA CTCGAACTGA AAGCTGCAGA GCTGGGAATC GATGAAGTAT TCATGACAGG CCTGGTTGAG GAGGTCTGCA TATACGTTAA TAGCCTTGGT TTCCTTGAAA GAGGCTTTCG AACAAATATC GTAAAAGGTT GTACTGCGCC TTTTGATGAA GAAAAAGGAA GAGAAGCCTT TAGCGAACTT ACGGGATGCG GAGCAAAAAT GGTCGACGAT ATTCCTGAAG ACATAAAGGT CATCCTGCTC CTCGAAGACG AACACGATGA AAATTCCGAA GAAATAAAGT CAGGAGAATG GCCACCCCAT AATATGAAAG GAACCACAGG GGCCATGACC GTAAAGACGA TCAGGGATGT GCTTGAGGGA AGGTATAGTT AA
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Protein sequence | MKSKRNGETL KALVIIDMTN DFVYETYEHE GTLYEGKLVA PMAKAIVDKI ARLIIKVVKG GTVSVIRIPK DHLNAFMNPE LELKAAELGI DEVFMTGLVE EVCIYVNSLG FLERGFRTNI VKGCTAPFDE EKGREAFSEL TGCGAKMVDD IPEDIKVILL LEDEHDENSE EIKSGEWPPH NMKGTTGAMT VKTIRDVLEG RYS
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