Gene Mbar_A2974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2974 
Symbol 
ID3625893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3824308 
End bp3824919 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content43% 
IMG OID637701819 
Producthypothetical protein 
Protein accessionYP_306449 
Protein GI73670434 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00851902 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.671104 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAA AGAGGAACGG TGAAACCTTG AAAGCTCTGG TTATTATAGA TATGACTAAC 
GATTTCGTAT ATGAGACCTA CGAACATGAA GGAACGTTAT ATGAGGGAAA ACTTGTAGCC
CCTATGGCAA AGGCAATTGT TGACAAAATA GCCAGGCTAA TAATAAAGGT AGTAAAAGGG
GGGACAGTCA GTGTTATCAG GATTCCGAAA GATCACCTAA ACGCCTTTAT GAACCCCGAA
CTCGAACTGA AAGCTGCAGA GCTGGGAATC GATGAAGTAT TCATGACAGG CCTGGTTGAG
GAGGTCTGCA TATACGTTAA TAGCCTTGGT TTCCTTGAAA GAGGCTTTCG AACAAATATC
GTAAAAGGTT GTACTGCGCC TTTTGATGAA GAAAAAGGAA GAGAAGCCTT TAGCGAACTT
ACGGGATGCG GAGCAAAAAT GGTCGACGAT ATTCCTGAAG ACATAAAGGT CATCCTGCTC
CTCGAAGACG AACACGATGA AAATTCCGAA GAAATAAAGT CAGGAGAATG GCCACCCCAT
AATATGAAAG GAACCACAGG GGCCATGACC GTAAAGACGA TCAGGGATGT GCTTGAGGGA
AGGTATAGTT AA
 
Protein sequence
MKSKRNGETL KALVIIDMTN DFVYETYEHE GTLYEGKLVA PMAKAIVDKI ARLIIKVVKG 
GTVSVIRIPK DHLNAFMNPE LELKAAELGI DEVFMTGLVE EVCIYVNSLG FLERGFRTNI
VKGCTAPFDE EKGREAFSEL TGCGAKMVDD IPEDIKVILL LEDEHDENSE EIKSGEWPPH
NMKGTTGAMT VKTIRDVLEG RYS