Gene Mbar_A2960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2960 
Symbol 
ID3625879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3808977 
End bp3809621 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content45% 
IMG OID637701805 
Producthypothetical protein 
Protein accessionYP_306435 
Protein GI73670420 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.666408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.118807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTCAG ATAACGGATC TTCAGAAGCT GTTCAGTCCG TGGAAAGAGT AGTTCCCGAG 
CCTTTGCCTC TGGAGGACCT TTTCCATATT TATGGAATTG AACGCAGCCA CGCAGAAAAT
GTGGCCAGGA ATGCGCTTGA GCTTTTTGAT ATCCTTAATT TTATCCATGG ATTGCACCCT
AAGATAAAAA GCCTTGTGGA AATAGCTGCA CTTGTTCATG ATACAGGTGT AGCTACGGAT
TTTAAGAACC ATCACAAAGC AGGAAGGAAT ATTTTACTCC TTCACTCTCC TTTAGAGGTG
CCTGAAAGGC TCAGGCCTGT TGTTGCCTGG ACTGCTTTCC TGCATAAAAA GAGCGTGGGA
AAAGAGAAAG TTGAGAAACT TAAAGGAAAA GGCTTCGGGA AAATGCCTGA GGACCTTCAG
GATCTTACTC TTAAAGTGGC TGCCCTTGTC CGGCTTGCTG ATGCCCTTGA TTACAGCAGG
ATGGAAAGCA GGCTTGGAAA AGTCACCTTT GGAAAGCAGA GTATCAAGTT CGAGATAGAG
GGGCAGAGAG CTGTGATTGA CGCAGAAAGA ATGGAAAAGA AATGTGATCT ATGGCACCTT
CTCTACAATA CCCGGCTTGA ATTCAGGCCT GCACCGAAGA AGTAA
 
Protein sequence
MSSDNGSSEA VQSVERVVPE PLPLEDLFHI YGIERSHAEN VARNALELFD ILNFIHGLHP 
KIKSLVEIAA LVHDTGVATD FKNHHKAGRN ILLLHSPLEV PERLRPVVAW TAFLHKKSVG
KEKVEKLKGK GFGKMPEDLQ DLTLKVAALV RLADALDYSR MESRLGKVTF GKQSIKFEIE
GQRAVIDAER MEKKCDLWHL LYNTRLEFRP APKK