Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2789 |
Symbol | |
ID | 3625117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3561428 |
End bp | 3561844 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 637701640 |
Product | transposase |
Protein accession | YP_306270 |
Protein GI | 73670255 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000043379 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000262457 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGGATGCAA AAACTCATAG ATCAATAGCG GATGAACTTT TCGAAGATAA AAGTCCAGAA ACCATCAAAA AATTTCTACG GAAAAATCTT GATTCATCAG AAACTGTGTT TATTGTTACG GATTTTGATA AGAGATATCC TAATATATTA AAGGAAGTTT TTGGAGAGAA GTTAGTGCAT CAATATTGTT TGATGCACTT AAACAAGCTT ATAGTTAGTG ATTTCCCAAA GAAAACAACT ATTGAACAAG AATTACTAAA ATACAGATTA TTGAATATAT TTTATAATCG TGAAAATGAG ATCAAATTTC TGGAAAAACT TCTATCTAAA GAACTTAACG TAATTAATAG CGAAAAAAAA CATTTAGAAT GGAGTAAAAA GGTAAAAAAG GAATTTAATC AAAATAGAGC TTTTTGA
|
Protein sequence | MDAKTHRSIA DELFEDKSPE TIKKFLRKNL DSSETVFIVT DFDKRYPNIL KEVFGEKLVH QYCLMHLNKL IVSDFPKKTT IEQELLKYRL LNIFYNRENE IKFLEKLLSK ELNVINSEKK HLEWSKKVKK EFNQNRAF
|
| |