Gene Mbar_A2580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2580 
Symbol 
ID3625906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3258763 
End bp3259431 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content41% 
IMG OID637701440 
Productiron-sulfur flavoprotein 
Protein accessionYP_306071 
Protein GI73670056 
COG category[R] General function prediction only 
COG ID[COG0655] Multimeric flavodoxin WrbA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.29861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0924411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTGA TAGCGATAAA CGGAAGTCCT CGAAAGAACT GGAACACAGC TACCCTGCTG 
GAAAAAGCTC TTGAAGGCGC AGCTTCGGAG AGTGCAGAAA CAGAATTAAT CCACCTATAT
GATCTCAACT TTAAAGGCTG CATAAGTTGT TTTGCCTGCA AACTAAAAGG TGGAAAAAGC
TTTGGAAAGT GTGCAGTAAA GGATGAACTG ACATCTGTGC TGGAAAGGTT GGAGGATGCC
GATGCTGTAA TACTCGGATC GCCAATTTAC CTTGGAAATT CCACAGGAGA AATGAGGTCA
TTTATGGAGC GATATATATT CCCGTATATA ACCTATTCTA TTGACATACA GACATTTTAT
CCCAGAAATA TTCCTGTTGG TTTCATCTAC ACTATGAACA TCACTGAGGA CCTTTTTGAG
CTGGTTGGGA CTAATAAGCT TATTGAGTCA AATGAATGGG TTGCAACAAG GATATTTGGG
TATTCCGAAT CGTTATGCAG CACCGATACA TACCAGTTTG ATGATTATTC AAAATACGCT
TCGTCTATTT TCAATCCTGA GGAAAAGGCA AAAAGGCGAG AAGAAGTGTT TCCGCAGGAC
TGCCAGAAAG CTTTTGAGAT GGGAGCCAGA TTTGTTAAGC AGCAAAAAGC TCTGGAGGCC
CAGAAGTAA
 
Protein sequence
MKVIAINGSP RKNWNTATLL EKALEGAASE SAETELIHLY DLNFKGCISC FACKLKGGKS 
FGKCAVKDEL TSVLERLEDA DAVILGSPIY LGNSTGEMRS FMERYIFPYI TYSIDIQTFY
PRNIPVGFIY TMNITEDLFE LVGTNKLIES NEWVATRIFG YSESLCSTDT YQFDDYSKYA
SSIFNPEEKA KRREEVFPQD CQKAFEMGAR FVKQQKALEA QK