Gene Mbar_A2501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2501 
Symbol 
ID3625694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3157260 
End bp3157979 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content47% 
IMG OID637701363 
Productribonuclease P protein component 3 
Protein accessionYP_305994 
Protein GI73669979 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1603] RNase P/RNase MRP subunit p30 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0929909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGTAAAC CTAAATTCTA CGACTTTTGC GTTCATGCAG TGCCTGATGG AGAAAATACG 
GTTGATCAAC TTTCTGCTCT TGCCCGGCAT TTAGGGTACA GCGGAATTGC GCTTACAAAC
CATTCGGATA AACTTCCTCA ATCACAACCT GTATTGCCCT CTACTAACGA ATTTGAGGTT
TTCAAGGGAA TCGAGCTTGT GGAGGAAAAT CCCTCGAAAC TTCACGGACT CATCGGAAAA
TTCAGGAAGT CCGTGGATGT CCTGATAGTT CACGGAGGTT CAGAAAACGT CAACAGGGCT
GCTCTGGAAA ACCCGAGAGT AGATATCCTG AACCACCCAG CTTTTGCTAA AAGCAGTGGA
TTAAATCAGG TGCTTGCAAA ATCCGCAGCC GAAAACGATG TTGCAATCAG CCTGATAATA
AGGCCCCTCC TTCATTCAAG AGGTCCAAGG CGCGTTCGTC TGCTGTCTAA TCTAAGAGCA
AACCTTGACC TTGCCAGAAA GTACGATGTT TCCCTTGTTC TTTCAAGTGG CGCAATGTCC
TGTTTTGATC TTCGCTCTCC CATGGAGACT CTTGCTCTGG CTGAAGTCTG CGGGCTTGAA
GAAGATGAGG CCCTTGAAGC CATTACTGTT GTACCTGAAA GAATAATCTC AAGGAACCGC
CCTGGTCCCG GCCATGTTAG AGAAGGTATT GAGGTGCTTG AGGAGGGAGA TTACTCTTGA
 
Protein sequence
MGKPKFYDFC VHAVPDGENT VDQLSALARH LGYSGIALTN HSDKLPQSQP VLPSTNEFEV 
FKGIELVEEN PSKLHGLIGK FRKSVDVLIV HGGSENVNRA ALENPRVDIL NHPAFAKSSG
LNQVLAKSAA ENDVAISLII RPLLHSRGPR RVRLLSNLRA NLDLARKYDV SLVLSSGAMS
CFDLRSPMET LALAEVCGLE EDEALEAITV VPERIISRNR PGPGHVREGI EVLEEGDYS