Gene Mbar_A2485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2485 
Symbol 
ID3626944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3137786 
End bp3138553 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content43% 
IMG OID637701347 
Producthypothetical protein 
Protein accessionYP_305978 
Protein GI73669963 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.410986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTGA CTGATAATAA AGGATTGGCA AAGCGTCTTT CCTATGAGAT CTCAGCTGCG 
TGGGCGATTG CCAAAAAGGA CATGCGGATT TACTACTTCA AGCCTAATAT CATAGTCTCC
GGCATTTTCT TCCCGCTTTT TATGTTCCTG GCCTTTGCTA TTGGAAAAAA CGCACCTCCA
GGTACCCTAA TTCCCGGGTT GATCTCGATT ACCCTCCTTT TTTCAGCCTC TTCAATAGAG
CCGGTCTCGA TACCTATTGA AAGACGGGTA AAGACCTTTG AACGTCTACT TTCAGCACCT
ATTTCATTTT ATTCACTGGT GTCAGGCGAG AGCATGAGTG GTTTTCTTTA TAGTCTCGGT
ATTGCATGTT TCCCACTTGC CATTGGTGTT ATTATATTCG GTACGCCTAT CATGAACGTA
CCGGTCCTTA TTATTTCCAT GATACTTACA GCGTTCTGTT TTGCGACGCT CGGGACATTA
TTTGCCGCAT ATCCCACTGA GAATGTGGGA GAGGTTATGT CGATGCTCAA CACGGTCAGA
CTACCACTTA TTTTTATTTC CGGAGTTTTT ATTCCTATAT CGACCATGCC CAGAATCGGC
CAGCAGATTG CACTGGTATC GCCTCTTACC TATGGAAATG ATATGATTGA GTATGCGTAT
ACCGGTAAAT CGTTATTTCC ACCACTACTG GATATTCTGG CACTCATAAT ATTCATCCTG
ATCTTTCAGG TAACGGCAAA CTACCTTTAC AAGAAGTTCA ATGAATGA
 
Protein sequence
MPLTDNKGLA KRLSYEISAA WAIAKKDMRI YYFKPNIIVS GIFFPLFMFL AFAIGKNAPP 
GTLIPGLISI TLLFSASSIE PVSIPIERRV KTFERLLSAP ISFYSLVSGE SMSGFLYSLG
IACFPLAIGV IIFGTPIMNV PVLIISMILT AFCFATLGTL FAAYPTENVG EVMSMLNTVR
LPLIFISGVF IPISTMPRIG QQIALVSPLT YGNDMIEYAY TGKSLFPPLL DILALIIFIL
IFQVTANYLY KKFNE