Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2485 |
Symbol | |
ID | 3626944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3137786 |
End bp | 3138553 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637701347 |
Product | hypothetical protein |
Protein accession | YP_305978 |
Protein GI | 73669963 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.410986 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATTGA CTGATAATAA AGGATTGGCA AAGCGTCTTT CCTATGAGAT CTCAGCTGCG TGGGCGATTG CCAAAAAGGA CATGCGGATT TACTACTTCA AGCCTAATAT CATAGTCTCC GGCATTTTCT TCCCGCTTTT TATGTTCCTG GCCTTTGCTA TTGGAAAAAA CGCACCTCCA GGTACCCTAA TTCCCGGGTT GATCTCGATT ACCCTCCTTT TTTCAGCCTC TTCAATAGAG CCGGTCTCGA TACCTATTGA AAGACGGGTA AAGACCTTTG AACGTCTACT TTCAGCACCT ATTTCATTTT ATTCACTGGT GTCAGGCGAG AGCATGAGTG GTTTTCTTTA TAGTCTCGGT ATTGCATGTT TCCCACTTGC CATTGGTGTT ATTATATTCG GTACGCCTAT CATGAACGTA CCGGTCCTTA TTATTTCCAT GATACTTACA GCGTTCTGTT TTGCGACGCT CGGGACATTA TTTGCCGCAT ATCCCACTGA GAATGTGGGA GAGGTTATGT CGATGCTCAA CACGGTCAGA CTACCACTTA TTTTTATTTC CGGAGTTTTT ATTCCTATAT CGACCATGCC CAGAATCGGC CAGCAGATTG CACTGGTATC GCCTCTTACC TATGGAAATG ATATGATTGA GTATGCGTAT ACCGGTAAAT CGTTATTTCC ACCACTACTG GATATTCTGG CACTCATAAT ATTCATCCTG ATCTTTCAGG TAACGGCAAA CTACCTTTAC AAGAAGTTCA ATGAATGA
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Protein sequence | MPLTDNKGLA KRLSYEISAA WAIAKKDMRI YYFKPNIIVS GIFFPLFMFL AFAIGKNAPP GTLIPGLISI TLLFSASSIE PVSIPIERRV KTFERLLSAP ISFYSLVSGE SMSGFLYSLG IACFPLAIGV IIFGTPIMNV PVLIISMILT AFCFATLGTL FAAYPTENVG EVMSMLNTVR LPLIFISGVF IPISTMPRIG QQIALVSPLT YGNDMIEYAY TGKSLFPPLL DILALIIFIL IFQVTANYLY KKFNE
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