| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2448 |
|---|
| Symbol | |
|---|
| ID | 3627884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 3088692 |
|---|
| End bp | 3089321 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637701313 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_305944 |
|---|
| Protein GI | 73669929 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00014778 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCAA AACTGATTCT AATTGGAGCA TTTTGTATAG TTTTATTAAC AGGAAACGTA
GCTGCAGATA GTCCATATGG CAAAATGGAT GTATATTACA ATAATAAACT TCTTCCAGGT
ACTGAAGTTG CAAAGCCGGT TCTAAAGATT GGAGAACCTT TTACTGTCGG TATAAACCTT
ACCGTTTCTC AAAAGTCAGA GGTGTCTGTA GAGTTAAGTG AGATCGGAGA AGGTTATTTT
GAAATTATAA ATGGTTCAAC TTCAAAAACG AATGTATATC GGGCTGATGT AATGGAAGAA
AACTCCAGTA TTCTCTATCA ATGGACAATT AAGCCTACTG AAAAGTGGGC TGGAGGCTCT
ATGCCAATTG ACATTGTTTA TCAGATAAAC GATTTTAATA CAGGAGATAT TTTGGTAAAC
AGTGGTTTTA CAGTTGCCTA CTGCACAATC TCCAACGAAC ACTACCAAGG CGAAACTCCT
ACTTCTGAGC AACCTGCATC CGAAAATCAA CCAATTTCTG GGCAGCCAGC TTCAGAAAAT
TCATCTTTAC CAGCGTCTGC ACCAGCTTTT AGTTTAGTAA CTGCAATTTC GGCACTTGTG
CTTGTATTCC TCAAACTCTC TCGCCGGTAA
|
|---|
| Protein sequence | MRAKLILIGA FCIVLLTGNV AADSPYGKMD VYYNNKLLPG TEVAKPVLKI GEPFTVGINL
TVSQKSEVSV ELSEIGEGYF EIINGSTSKT NVYRADVMEE NSSILYQWTI KPTEKWAGGS
MPIDIVYQIN DFNTGDILVN SGFTVAYCTI SNEHYQGETP TSEQPASENQ PISGQPASEN
SSLPASAPAF SLVTAISALV LVFLKLSRR
|
|---|
| |