Gene Mbar_A2423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2423 
Symbol 
ID3625464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3061322 
End bp3061726 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content44% 
IMG OID637701291 
Producthypothetical protein 
Protein accessionYP_305923 
Protein GI73669908 
COG category[R] General function prediction only 
COG ID[COG2522] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0429086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACTC CGTGTCAGAA GATTGTGTGG GATCTGGTTC CCGCAATAAG GGCCAGTCTT 
GCAATCGAAC TTGTAAAAAA AGGACAGTCG CAGGCAGCGT CGGCAAAGTT GCTGGGGATT
GCACCGTCGG CAGTTTCTCA GTACATTTCG GGAAAAAGAG GCTACAGAAT TGAGTTTCAG
GGCGAGACGA AAGAATTGAT CGAAAAGCTT GCTCAGGATC TGATCGACAA CAAAGTCAGC
GACTTTGTAG CAAGAATCTG TGAGATCTGT GTAAGTGCCA GAGGAATTGA GAATAAGTGC
AATAGTGAAT GTGCCAAGGA AGAGCAAGCC AATTATAAAA CGGAAGATAA AACGGAAGAT
AAAGCGGAAG ATAAAGCGGA AGATAATAAA AAATCTGAAG CATAA
 
Protein sequence
METPCQKIVW DLVPAIRASL AIELVKKGQS QAASAKLLGI APSAVSQYIS GKRGYRIEFQ 
GETKELIEKL AQDLIDNKVS DFVARICEIC VSARGIENKC NSECAKEEQA NYKTEDKTED
KAEDKAEDNK KSEA