Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2423 |
Symbol | |
ID | 3625464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3061322 |
End bp | 3061726 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637701291 |
Product | hypothetical protein |
Protein accession | YP_305923 |
Protein GI | 73669908 |
COG category | [R] General function prediction only |
COG ID | [COG2522] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0429086 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACTC CGTGTCAGAA GATTGTGTGG GATCTGGTTC CCGCAATAAG GGCCAGTCTT GCAATCGAAC TTGTAAAAAA AGGACAGTCG CAGGCAGCGT CGGCAAAGTT GCTGGGGATT GCACCGTCGG CAGTTTCTCA GTACATTTCG GGAAAAAGAG GCTACAGAAT TGAGTTTCAG GGCGAGACGA AAGAATTGAT CGAAAAGCTT GCTCAGGATC TGATCGACAA CAAAGTCAGC GACTTTGTAG CAAGAATCTG TGAGATCTGT GTAAGTGCCA GAGGAATTGA GAATAAGTGC AATAGTGAAT GTGCCAAGGA AGAGCAAGCC AATTATAAAA CGGAAGATAA AACGGAAGAT AAAGCGGAAG ATAAAGCGGA AGATAATAAA AAATCTGAAG CATAA
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Protein sequence | METPCQKIVW DLVPAIRASL AIELVKKGQS QAASAKLLGI APSAVSQYIS GKRGYRIEFQ GETKELIEKL AQDLIDNKVS DFVARICEIC VSARGIENKC NSECAKEEQA NYKTEDKTED KAEDKAEDNK KSEA
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