| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2376 |
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| Symbol | |
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| ID | 3626717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 3005034 |
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| End bp | 3006554 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637701245 |
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| Product | glycine betaine/L-proline ABC transporter, ATP-binding protein |
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| Protein accession | YP_305877 |
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| Protein GI | 73669862 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.23096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.11127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAA AAATAAAACT TGAAGTTCGA AATATTACCA AGGTTTTTGG TAAAAATCCT
CAGAGAGTAA TCTCCCTTCT AAATGAAGGC TTCTCCAAAA GTGAAATTTT TGAAAAAACA
AAACAGACTG TTGGGCTCAA CAACGTCAAT TTCGAAGTCT ACGAAGGAGA GATCTTCGTC
ATAATGGGGC TTTCGGGTTC AGGTAAGTCT ACTCTTTTAC GCTGCTTAAA CCGCCTCATC
GAGCCAACTG CGGGAGAAAT CCTGATAGAT GGGCAGAACA TCACGCAGAT GAATGCGGAA
GAACTGCGTG ATGTTCGCAG AACCAGGATT GGCATGGTAT TTCAAAACTT TGCCCTGCTT
CCCCATAAAA TCGTGCTTGA TAACGTTGCT TATGGGCTTG AGATCCAGGG GATTCCTAAA
GAAGAACGCT ACTCTAAGGC GCTTGCATCC ATAGAAACCG TGGGCCTAAA AGGCTATGAA
CATAGCAGAA TAAACCAGTT AAGTGGAGGC ATGAAGCAGA GAGTTGGGCT TGCAAGGGCG
CTTGCCAATG ATCCTGAGAT CCTGCTCATG GACGAAGCTT TCAGTGCTCT TGATCCACTG
ATCAGGAACG AGATGCAAGA CGAACTGATT GCCCTTGAGG ATAGGGTGCA AAAAACAATT
ATCTTTGTCT CACATGACCT GGATGAAGCC CTGAAACTCG GGGACCGCAT CGCTATCATG
AAAGACGGTG AAGTAGTTCA GATAGGGACT CCTGAAGAGA TCCTGACCGA ACCTGCAAAT
TCCTATGTTT CAAAGTTCGT TGCAGGTGTT GACAGGTCTA AAATTCTTAC TGCTGAATCG
GTTATGAAAC GGCCTGAACC GCTAGTGTCT ATCAATTCCG GGCCCAGGGT TGCTATTCAG
TTGATGAAAG ATTATGGGAT TTCCTCGATT TATGTAGTTG AGGGAAAGAA CAGGCACCTG
AAAGGTATAC TTATGATAAG TGATGCACTT GAAGCCCTTA GGAGCGGGAA GAGCCTTGAA
GCAGCAATGT TTCCGGATGC CCCACATGTG GCCCCAGACC GACCTCTTAG TGAGGTGATT
CCCTTGATTG CGGAAAGCCA GTACCCCCTT GCTGTGGTCA ATGATTCAGG AAAACTGCTT
GGGATTATAG TCCGGGGCAA TGTACTTGGT GCTCTTGCAA TTGCTGGAGA AAACGAGCAG
TTTGGAGTCT CCAACGAAAA GGCCTCAGAA GAAAAGACTT CAGAAGAAAA AACCTCAAAA
GAAAAAACCT CAGAAGAAAA AACCTCAGAA GAAAAAAACA TTTCAGCGAA AACTTTTGAA
GGAAAGCCTG CTGAGAAAAC TGTCCTAATA GGTAAAAATG AAGGAGAAGC TGGACCTCCC
TCTAAAAGTT CAGGCGCTCC GAATGCCCAA AACAATATAA TTTCCAACGG AGTTGACAGC
GAGTCTGTAC CTACCGAACT GGCTACTGAG GAACCTCTCA GGTCTGACTC AGAGCAGGAA
CCAGAGGTGA AAATATGCTG A
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| Protein sequence | MEKKIKLEVR NITKVFGKNP QRVISLLNEG FSKSEIFEKT KQTVGLNNVN FEVYEGEIFV
IMGLSGSGKS TLLRCLNRLI EPTAGEILID GQNITQMNAE ELRDVRRTRI GMVFQNFALL
PHKIVLDNVA YGLEIQGIPK EERYSKALAS IETVGLKGYE HSRINQLSGG MKQRVGLARA
LANDPEILLM DEAFSALDPL IRNEMQDELI ALEDRVQKTI IFVSHDLDEA LKLGDRIAIM
KDGEVVQIGT PEEILTEPAN SYVSKFVAGV DRSKILTAES VMKRPEPLVS INSGPRVAIQ
LMKDYGISSI YVVEGKNRHL KGILMISDAL EALRSGKSLE AAMFPDAPHV APDRPLSEVI
PLIAESQYPL AVVNDSGKLL GIIVRGNVLG ALAIAGENEQ FGVSNEKASE EKTSEEKTSK
EKTSEEKTSE EKNISAKTFE GKPAEKTVLI GKNEGEAGPP SKSSGAPNAQ NNIISNGVDS
ESVPTELATE EPLRSDSEQE PEVKIC
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