Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2079 |
Symbol | |
ID | 3626474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 2630573 |
End bp | 2631133 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637700955 |
Product | XRE family transcriptional regulator |
Protein accession | YP_305590 |
Protein GI | 73669575 |
COG category | [K] Transcription |
COG ID | [COG3620] Predicted transcriptional regulator with C-terminal CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0185194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTTC CAACACCCGA AGATCTTAAA AAAAGAAGAA ATGAACTCGG GCTTACCCAG AGCGATCTGG CTAAAAGGGC AGGAGTAAGT CAGCCCCTTA TAGCTCGTAT AGAATCGGGA GACGTAGATC CCAGGCTTTC GACTGTCAGG AAAATCCTTG ACGCTTTTGA GGAAGTTGAA AAGGAACAGC AGATTATTAT AATAGATCTG ATGCATTCCC CTGTAATTCA TGTTTCACCA GGCGATTCTG TGGAAGAAGT AGTAAACTTG ATGCAGAAGT ATGGTTTTTC ACAGGTTCCT GTGCTTGATA GGGGCATTCC TGTTGGAAGT GTTTCCGAAG ACATGATAGT GAAATTGATG GCCGAAAGTA AGAAAAAATC AATTTCCCAT TTGAAAATTT CTGAGATAAT GGGAGAGGCC TTCCCAACAG TGTCTCCAGG TATTTCTATC TCAGTCGTAT CGCACATGCT GGAAGGAAAT CCGGCCGTAC TGGTAGTAGA AAAAGGAGCA GTTATCGGCG TCGTGACGAA ACATGATGTA ATGACGCTTC TCCAGGGCTA A
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Protein sequence | MQLPTPEDLK KRRNELGLTQ SDLAKRAGVS QPLIARIESG DVDPRLSTVR KILDAFEEVE KEQQIIIIDL MHSPVIHVSP GDSVEEVVNL MQKYGFSQVP VLDRGIPVGS VSEDMIVKLM AESKKKSISH LKISEIMGEA FPTVSPGISI SVVSHMLEGN PAVLVVEKGA VIGVVTKHDV MTLLQG
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