Gene Mbar_A2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2079 
Symbol 
ID3626474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2630573 
End bp2631133 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content44% 
IMG OID637700955 
ProductXRE family transcriptional regulator 
Protein accessionYP_305590 
Protein GI73669575 
COG category[K] Transcription 
COG ID[COG3620] Predicted transcriptional regulator with C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0185194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTTC CAACACCCGA AGATCTTAAA AAAAGAAGAA ATGAACTCGG GCTTACCCAG 
AGCGATCTGG CTAAAAGGGC AGGAGTAAGT CAGCCCCTTA TAGCTCGTAT AGAATCGGGA
GACGTAGATC CCAGGCTTTC GACTGTCAGG AAAATCCTTG ACGCTTTTGA GGAAGTTGAA
AAGGAACAGC AGATTATTAT AATAGATCTG ATGCATTCCC CTGTAATTCA TGTTTCACCA
GGCGATTCTG TGGAAGAAGT AGTAAACTTG ATGCAGAAGT ATGGTTTTTC ACAGGTTCCT
GTGCTTGATA GGGGCATTCC TGTTGGAAGT GTTTCCGAAG ACATGATAGT GAAATTGATG
GCCGAAAGTA AGAAAAAATC AATTTCCCAT TTGAAAATTT CTGAGATAAT GGGAGAGGCC
TTCCCAACAG TGTCTCCAGG TATTTCTATC TCAGTCGTAT CGCACATGCT GGAAGGAAAT
CCGGCCGTAC TGGTAGTAGA AAAAGGAGCA GTTATCGGCG TCGTGACGAA ACATGATGTA
ATGACGCTTC TCCAGGGCTA A
 
Protein sequence
MQLPTPEDLK KRRNELGLTQ SDLAKRAGVS QPLIARIESG DVDPRLSTVR KILDAFEEVE 
KEQQIIIIDL MHSPVIHVSP GDSVEEVVNL MQKYGFSQVP VLDRGIPVGS VSEDMIVKLM
AESKKKSISH LKISEIMGEA FPTVSPGISI SVVSHMLEGN PAVLVVEKGA VIGVVTKHDV
MTLLQG