Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2069 |
Symbol | |
ID | 3626406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2613069 |
End bp | 2614730 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637700944 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_305580 |
Protein GI | 73669565 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.297693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.926907 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAGCG ATATCATCAA AGAGGGACCT GAACGTGCTC CCAACCGTTC ACTTCTGAAA GCGACAGGAG TCACAGATTC CGAGATGAGG AAACCATTCA TCGCAGTCGT TAATTCCTGG AACGATATAA TTCCTGGCCA TATTCACCTG AATAAACTTG CTGAGGCTGT AAAAGCCGGA ATCAGGAACG CCGGAGGAGT TCCTTTTGAA TTCCATACTA TAGGAGTCTG CGATGGAATT GCAATGGGAC ATGAAGGTAT GAAATATTCC CTTCCCAGCA GAGAAGTTAT TGAGGACACG ATAGAACTTA TGGTTAAAGC CCATCAGTTT GATGGGATTG TCCTTATTCC CACATGTGAC AAGATCGTGC CGGGTCACCT GATGGCAGCA GGCAGACTTG ATATCCCTGC AATTGTCGTA ACCGGAGGGC CTATGCTTCC TGGTTATGTC GATGACAAAT ATACAGACCT GATCTCGGTT TTCGAAGGAG TGGGTGCTTA CAGCACAGGC AAACTCTCAG AACGTGATCT TAAAAGGCTT GAAAATCTTT CCTGTGGAGG AGCCGGATCC TGTGCAGGGA TGTTTACCGC AAACACTATG GCCTGTGTAA CCGAAGCACT TGGTCTGAGC CTTCCAGGCT GTGCAACTGC TCACGCAGTG GATGCAAAAA AGGCCCGCAT TGCCAAGGAA TCCGGTGAGC GTATCGTCGA AATGGTAAAA GAGAACCTGA CTCCCAGAAA GATTGTCACT TTTAAGTCTT TTGAAAACGC CATAATGGTA GACATGGCAG TCGGAGGGAG CACAAATACC ACTCTGCACC TTCCTGCCCT TGCCCACGAA TTCGGGCTGA ATCTTCCTCT TGAAAAATTT GATGAATTGA GCAGAGAAAC CCCTCACCTG ATATCGCTTC GCCCTGGCGG CCCTAATTTT ATGCTACACT TTGACAGGGC AGGCGGGGTT CAGGCAGTCA TGCAGAGGCT TTCCTCCAAA CTTCACCTGG ATCAGCTTAC AGTAAATGGC AAGACTATCG GGGAAAACTT GAACGAGTTT GAGATTATTA ACCCGAAGCT CAATAAAGAG ATAATTGCAA CTCTTGAAAA GCCTATACAT GCCGAAGGAG GAATTGCAGT CCTTAAAGGC AACCTTGCCC CTAACGGTTC GGTCGTAAAA CAGGCAGCTG TTGACCCTAA AATGCGCGTT CATACAGGCC CTGCCAAAGT TTATGACTGT GAAGAAGATG CTATGGAAAA TATCCTTGCA GGCAATGTAA AACCTGGAGA TATTGTAGTT ATCCGCTACG AAGGCCCGAA AGGAGGGCCT GGAATGAGGG AAATGCTTGC GGCTACAGCC GCAATAGGAG GTATGGGCCT GCTGGAGTCA GTTGCTCTGG TAACTGACGG ACGCTTTTCA GGAGGCACAC GTGGGCCATG TATAGGACAT ATCTCTCCCG AAGCAAGCGA AGGAGGGCCA ATTGCCCTGG TAAAAGATGG GGATATGATA GAGATTAATA TTCCTGAAAG AGTTCTGAAC CTTAAAGTCT CAGAAGAAGA GCTTGAGCAA AGAAAGGCGG CATTCGTACC TCCAAAAAAG GAAGTTACAG GCTACCTTGC AAGGTACCAG CGTTCCGTTC ACTCTGCAAA TACAGGCGGA ATAGTGGACT GA
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Protein sequence | MRSDIIKEGP ERAPNRSLLK ATGVTDSEMR KPFIAVVNSW NDIIPGHIHL NKLAEAVKAG IRNAGGVPFE FHTIGVCDGI AMGHEGMKYS LPSREVIEDT IELMVKAHQF DGIVLIPTCD KIVPGHLMAA GRLDIPAIVV TGGPMLPGYV DDKYTDLISV FEGVGAYSTG KLSERDLKRL ENLSCGGAGS CAGMFTANTM ACVTEALGLS LPGCATAHAV DAKKARIAKE SGERIVEMVK ENLTPRKIVT FKSFENAIMV DMAVGGSTNT TLHLPALAHE FGLNLPLEKF DELSRETPHL ISLRPGGPNF MLHFDRAGGV QAVMQRLSSK LHLDQLTVNG KTIGENLNEF EIINPKLNKE IIATLEKPIH AEGGIAVLKG NLAPNGSVVK QAAVDPKMRV HTGPAKVYDC EEDAMENILA GNVKPGDIVV IRYEGPKGGP GMREMLAATA AIGGMGLLES VALVTDGRFS GGTRGPCIGH ISPEASEGGP IALVKDGDMI EINIPERVLN LKVSEEELEQ RKAAFVPPKK EVTGYLARYQ RSVHSANTGG IVD
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