Gene Mbar_A1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1966 
Symbol 
ID3625505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2457943 
End bp2458731 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content35% 
IMG OID637700846 
Productflagellar accessory protein FlaH 
Protein accessionYP_305482 
Protein GI73669467 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2874] Predicted ATPases involved in biogenesis of archaeal flagella 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAA ATATGGAAGG GGCGTTATTT CTTGAAAACG AATCATTTTG TGAAGAAATA 
CCAGATAATC CGAATATTGA GAAGGAAAAA CCCTTAGAAT TTATATCCTC AGGAAATCTG
GAAATTGATA GGAAACTGGA AGGAGGCATA CCCGTAGGTT CTTTATGCCT TCTCGAAGGG
GCAAAAGATA GTGGAAAATC AATTTTCATG CAGCAGATTA TGTGGGGAGC TCTGAACCAG
GATAAAAAAG TTTTAGCTTT AACAACGGAA AAAACCTCCC GAAACCTGCT GAATAATATG
GAAAGCCTGA AGCAGGATAT ATCAGATTAT TTCATAATAG GTAGATCTAA AATTTTTGAA
ATAAATGCAA GCGATGTTGA AGAAAATCCT GAAATAAGTG AAAATCTTCT AGAGATAATG
CTCGAATGCA TAAAAGAATG TGAAGAAGAA TTAATTCTAA TTGATTCCTT AACGATCTTA
GCGGTTAATG CCTCTGAAAA TACCTTATTG AATTTTTTTA GGGAGTGTAT AAAACTTTGT
GATAAAAAAA AGACTATTTT AATAAGTGTT CACGGGTATG CTTTCTCCCA GGAAGTGCTT
TACAGGCTAA GATCGGTTTG CAATTCATGC CTGGAGCTGA GAATTGAACA GGTCGGAGAT
AAGCTAATAA AGACTATGGA AATTCAGAAG TTGAGGGGTG CCAAAAAAAC TACTGGAAAT
ATGTTAAGTT TTGATGTGAA CAGTGAGTGT GGGCTTAAAA TAATTCCAGT TTCGAAAGTC
AAAGCCTGA
 
Protein sequence
MEENMEGALF LENESFCEEI PDNPNIEKEK PLEFISSGNL EIDRKLEGGI PVGSLCLLEG 
AKDSGKSIFM QQIMWGALNQ DKKVLALTTE KTSRNLLNNM ESLKQDISDY FIIGRSKIFE
INASDVEENP EISENLLEIM LECIKECEEE LILIDSLTIL AVNASENTLL NFFRECIKLC
DKKKTILISV HGYAFSQEVL YRLRSVCNSC LELRIEQVGD KLIKTMEIQK LRGAKKTTGN
MLSFDVNSEC GLKIIPVSKV KA