Gene Mbar_A1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1946 
Symbol 
ID3627612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2431437 
End bp2432870 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content56% 
IMG OID637700826 
Productputative ferredoxin reductase 
Protein accessionYP_305465 
Protein GI73669450 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCA ATGATGCCAA GAAAACTGTC TCCTCTGTAC AAAGAATAGT TATCCTCGGC 
GCCTCGTTGG CTGGTTTGAG TGCTGCAGAG GCACTTCGTT CCGAGGGATT TGCCGGGACG
TTAACTGTAA TCGGCGATGA ACCATATGCT CCCTATGATC GCCCGCCTCT GTCTAAAAAT
GTCCTCACAG GCTGGCTACC AGCAGAGCAC ACGACCTTAC CGCAGAGTGT TGATCTACAG
GCCGAGTGGT TGCTTGGTGT GCCCGCTACA GGGCTTAATC TGGATAACCG GGAGGTCGAG
CTTGCCGATG GGAGACGGTT TGGATTTGAC CGTTTGTTGA TCGCCACAGG GGCGCGTGCC
AGGCCGTGGC CAGATTCGGC ACAGGCTGCT CTTGATGGAG TTTGCCTATT GCGTACCCGC
GATGATGCTG CCCAGCTACG AGCCCGGTTA GCTGCCAGGC CGAAGCGAGT ACTGGTGATT
GGTGGTGGTT TCATCGGCTC CGAGGTTGCT TCAGTCTGCA GAGAACTAGG TCTGGCTGTC
ACAGTCACAG AACGCAGCGC TACACCTCTC ATAGGCGCTC TCGGTGCGGC TGCGGGTACG
CTTGCTGGCC AGCTCCAGCG CGTGCATGGC GTCGATCTGC GCTGCAACGT CACGGTTATG
GCGCTGGAGG GAGATGAGAG TGGGCGGCTA CGTCGTGCCT ATCTTTCGGA TGGCGATATA
CTCGATATCG ATGTGGCTGT GATCGCTCTT GGAGCAATAC GAAACGTCGA ATGGTTACAT
AATTCTAGGC TGGCGTTTGA CTCCCATGGG ATAGCCTGTG ATGCTGCCTG TCGTGCTTTT
GATACCGATG GAATGGTCAC AGATGACATT TTCGTTGCTG GGGACGTGGC TCGCTGGCCT
CACCCGCTTT ACGAAGGCGA GCTACTGGCA GTCGAGCACT GGGGAAATGC TATTGAGCAG
GCAAGGACGG CCGCACATAA TATGGTGAGT GCTCCGACAG ATCTCAGGGC ATACAAAACC
CTGCCCGCCT TCTGGTCTCG TCAGTTTGGT GTCAACCTGA AGACGGTCGG CCTTCTACGC
TTCGCCGATG AAGTTGTGCT CACACAGGGC TCTATCTCGG AACGCCGGTT GGTTGCAGCC
TATGGCTACA AAGGCAGAAT TGTTGCAGCG CTCACCGTAA ATATGGCCCG CTGGTTGCCT
GCTTACCGGG CAATGATCGA GGACCGTGCA CCGTTTCCGC CCGTACTTCA TGCTCCTGAT
GGTCCAGCTG AGCTTCGGCC AGTTCCTGCC GGATTTCCAT TTCGTGGACA ACCTACCCAC
AGCCCTAATG CTACACAGAC TGGTCCAGGT CCTAGCACAC CTCCTCCAGA AGAATCGTCT
ACAAGCACCA AAGTGAAGGA CCCTCGTGTA CCGCCAGGGT TCCGGCCCAA ATGA
 
Protein sequence
MKSNDAKKTV SSVQRIVILG ASLAGLSAAE ALRSEGFAGT LTVIGDEPYA PYDRPPLSKN 
VLTGWLPAEH TTLPQSVDLQ AEWLLGVPAT GLNLDNREVE LADGRRFGFD RLLIATGARA
RPWPDSAQAA LDGVCLLRTR DDAAQLRARL AARPKRVLVI GGGFIGSEVA SVCRELGLAV
TVTERSATPL IGALGAAAGT LAGQLQRVHG VDLRCNVTVM ALEGDESGRL RRAYLSDGDI
LDIDVAVIAL GAIRNVEWLH NSRLAFDSHG IACDAACRAF DTDGMVTDDI FVAGDVARWP
HPLYEGELLA VEHWGNAIEQ ARTAAHNMVS APTDLRAYKT LPAFWSRQFG VNLKTVGLLR
FADEVVLTQG SISERRLVAA YGYKGRIVAA LTVNMARWLP AYRAMIEDRA PFPPVLHAPD
GPAELRPVPA GFPFRGQPTH SPNATQTGPG PSTPPPEESS TSTKVKDPRV PPGFRPK