Gene Mbar_A1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1896 
Symbol 
ID3624297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2363157 
End bp2364149 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content42% 
IMG OID637700777 
Producthypothetical protein 
Protein accessionYP_305416 
Protein GI73669401 
COG category[S] Function unknown 
COG ID[COG2512] Uncharacterized membrane-associated protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTTTC AGGGAAATGC AATCGCGGCC ACAATTCACG GGACAGTTTA TGAGTGGGAT 
ACTTTCAAGC CTCTTAATAA CTCAGTTGTA GAGATCAATT CTACCCCGGA ACAGAATGTT
ATTGCAACGG ATTCGGAGTA CTCTTTCAAC CTCACCCCCG GAATCTATAC AATAAATGCC
AGCTATCTTG AAGGAAACAA GATAGTTTAT ACAGCTCAGG AAAAGGTTGA GGTCTCAGGC
GAAGGAGAGT ATATACATGA TCTCCTCCTT TTCCCACCTT CTCATGAAGA GCTTCTGGAC
CAGGATAACT TTGAAGCCCC TTATCTGGAT TATGAAGAGA CAGAGCCCGT ATCTCAGGCA
AACTCTAACT ATGCCGTTTT AGCTCCTGCT TTCCTGGTTC TTATAGTCCT GCTGTTAGCC
CTGCTGCTGG CAGCCTATCT TTTAGGAAAG AAGCATCAAA AATCGGCAAA GACTTCTTTT
CCTGAAGAAT GCCAAGAACC ATATCTGTCG AAGTCTGAAA GCCCCATAAA GAATGAAATA
TTTTCTGAAG AGGCCGAAAT CGATTCCTCC ACAAACATTC TTGAAACTTC GGAACTGAGC
GCTGAGCAGT TTGCCGAAAA ATCCGAAACA TCCAATACTG ACAAATATAT ACAGCAGAAC
AGGCTTACAG AAGAGGCTCA GAATATCTCG AGTTATCCTG TCCATGAGAA TGAACCTAAT
AAATCGAATT TAGAAATTAA GGAACATTCA AAGCTCAATC TTCCTGAGGA TCTCAAGGAA
CTTCTTGAAA TGATACGAGC TAGTGGAAAC CGAATCACCC AGAGAGAACT GCGAAAAAAA
TCCCCTTATT CGGAGTCCAA AGTCAGTCTT ATGCTCTCGG ACCTTGAGGA GCGCGGTCTA
ATTGAAAAAT TCAAAAGAGG AAGAGGAAAT ATAATCCGTA TCCCGGATGT ACATATATCC
AAACAGACCA AACATGAAAG CAAGAAGGAG TAA
 
Protein sequence
MVFQGNAIAA TIHGTVYEWD TFKPLNNSVV EINSTPEQNV IATDSEYSFN LTPGIYTINA 
SYLEGNKIVY TAQEKVEVSG EGEYIHDLLL FPPSHEELLD QDNFEAPYLD YEETEPVSQA
NSNYAVLAPA FLVLIVLLLA LLLAAYLLGK KHQKSAKTSF PEECQEPYLS KSESPIKNEI
FSEEAEIDSS TNILETSELS AEQFAEKSET SNTDKYIQQN RLTEEAQNIS SYPVHENEPN
KSNLEIKEHS KLNLPEDLKE LLEMIRASGN RITQRELRKK SPYSESKVSL MLSDLEERGL
IEKFKRGRGN IIRIPDVHIS KQTKHESKKE