Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1796 |
Symbol | |
ID | 3625158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 2226051 |
End bp | 2227544 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637700678 |
Product | outer membrane protein |
Protein accession | YP_305317 |
Protein GI | 73669302 |
COG category | [S] Function unknown |
COG ID | [COG1520] FOG: WD40-like repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000580169 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGA ATATAAAAAT AAGATTTATT CCAGTTATTC TGTTTTTTCT GTCCATTTTA TTACTTTCCT CAACAACCAT GGCTTCCAAT AATACTGATA CTTGGAGCCA GTTCCATAAA GACACTGCAA ACGCCGGCTT CTCCTCAGGG GGAGCTCCGG ATACTGAAAA ACTGCTCTGG GTAAGCGACC CTATCTGGGC GATTCCCAGC TCTTCACCTG TAATTGCGGA TGGGAAGGTT TTTATCAAGT GTGGAGTAGA TCACGCTCCC GATTCGATGT CAACAAATCC CGATGAATTA AGGATAGTGA CCATTGATGA ATTTACGGGA AATGTAATTT CTTCCGATGA AATAGGTCTG GTTTCACCCG GATGGGGATC TCTCTGTTAT GAAAATGGAA AGATATGGTA TGGACAGGCG GAAGCTCTCA ATGGTGGGGC AATGGTTGCA GATGGGAAAG TATTTGACAG TGATGGTTTC TCTCACCATT ATTGCTGTAC TGATGCAGAA ACTGAAGAAG AACTCTGGAA CTTTACAGTT ACCGGAGTTG CAATCGGCAC ACCGGCATAT TATGGAGGTA AGGTTTACCT AACAAGCGGA CCGCTCTTTA GTTCTCCGGG ACACGTTTAC TGTATCGATC CCGATAGTGG GAACGAGATC TGGAACCAGA CACTCCCTTA CGAGGCAGGT GGGTCTCCTG CTGTCTCTGA GGGTGTTGTC TATGCAACTA CTTACGATGG AAAGCTTTAC GCGCTGGATG CCGAAGACGG GTCAATCCTC TGGAATGCAA CTGTTCCAAG TACCGATGTT TCATCTACCC CGGCAATTGC TTATGGTAAT ATCTACATTT CGGGTGGATG TCCCGGATTT AGCACAATTG AAACCTACTG CTTCAACGCA ACAACTCATG AACTGGTCTG GAATACTTCT GCCGAAGATA AGATAGGAGG CTGGACCACA TCAGTTGCTG TTGCAGATGA TATGGTCTTT GTAGGAAAAT ACGCCGAAGA TGATTACTTC GGATACGCCG GCACATATGC TCTCGATGCT CATACAGGGG ATGTAATCTG GAGTTATCCC CACGGAGGCT CTTCACCTGC AATTTCCGAC GGGATAGTTT TCACAATTGG AGCTGATGGA AGAGTTTATG CCTTTGCTGA TTCTGAGGAA GTTTTGCCAG CTGTTTCTAT CAAGTGTAAT ACGTCCAGTC TTGACTTTGG AACTCTGGCT TCTGGAAATA AAAGTATTTT ACACCTGAAT ATCACGAATG CCGGGAGCTC TAATGTAACT ATTTCAGCCG AACCTGAAGA AGGCAATACC CAATTATACA ATGATACGCT CTTTTTCGGC TCCACTTTCT GGAACCAGTA TTCAAAGCTG ATCTCAAGCC AAAAGACGGA AGAACTGAAA CTCGTGCTGG ATGTGCCTGA TGGATACGAA GGAGAGCTGA ATAAAGAAAA AGGAAATTTG ATTTTCTGGG GGGAGTCTGT ATAA
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Protein sequence | MNKNIKIRFI PVILFFLSIL LLSSTTMASN NTDTWSQFHK DTANAGFSSG GAPDTEKLLW VSDPIWAIPS SSPVIADGKV FIKCGVDHAP DSMSTNPDEL RIVTIDEFTG NVISSDEIGL VSPGWGSLCY ENGKIWYGQA EALNGGAMVA DGKVFDSDGF SHHYCCTDAE TEEELWNFTV TGVAIGTPAY YGGKVYLTSG PLFSSPGHVY CIDPDSGNEI WNQTLPYEAG GSPAVSEGVV YATTYDGKLY ALDAEDGSIL WNATVPSTDV SSTPAIAYGN IYISGGCPGF STIETYCFNA TTHELVWNTS AEDKIGGWTT SVAVADDMVF VGKYAEDDYF GYAGTYALDA HTGDVIWSYP HGGSSPAISD GIVFTIGADG RVYAFADSEE VLPAVSIKCN TSSLDFGTLA SGNKSILHLN ITNAGSSNVT ISAEPEEGNT QLYNDTLFFG STFWNQYSKL ISSQKTEELK LVLDVPDGYE GELNKEKGNL IFWGESV
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