Gene Mbar_A1751 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1751 
Symbol 
ID3625796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2145617 
End bp2146375 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content42% 
IMG OID637700630 
Producthypothetical protein 
Protein accessionYP_305273 
Protein GI73669258 
COG category[S] Function unknown 
COG ID[COG1693] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000678533 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAA ATGGATACCG TGTTCAATTT ACATCATCTA GAATAAAGGA TCTTATGTAC 
AGGACTACGT TTGATCCTAA AAAAATGGAT GGAGATATCA TTCTTAATCT TTCACTTATT
GATAAAAAAG ATCTAGACGA TGTGCTTGGG ATCTTTAAAA TGGTAATCTC AAGTGGGCTT
TCTGTGACTC CCTATGTTAA GATAGTTTCC GAGGGCGAAT CTATAGGAGA CCTGACTGTC
GAAAAGGGAA AGGTAGGTGT CGGGACCGTA TGCAGCATTA CGATTGACGG CGTACTTCTT
AAGGCAGGAA TTCCTGTAAA CCCTAAACTT GGAGGAGTTG TTCAGATCCG AAATGGAGTT
CCTGTTCGTT TCACTGATGT GCTGACCTAT GTAAGTACGA CTGTAGATCC GCTTGAAATC
CTGATGTCAC AGGGTATTAC TTCTGTATCG GAAATGCTCA GGACAGGCTC AGGTAAGGTT
CTTGCAAATC TCAGGGAAGC TCCTATGGTT GCAAGAGATG AAATTGAAAG CTGCCTATCT
GATCTTCTGG ATGCGGGCTT TAGTGGAATC TTGGAAGTTG GGGAACCAAA CACACGGGTT
CTGGATGTTC CAATAGAGAG AGATCATCTC GGAATAGTCG TCATAGGAGG GACAAATCCT
ATGGCTGTTG TACAGGAGTA TGGAATTGCC ATAGACACCA GTGCAATGTC AAGACTAATT
TCGTTTAAAG AGATGAGCAG GATTGAAGAT CTGGTTTAA
 
Protein sequence
MQKNGYRVQF TSSRIKDLMY RTTFDPKKMD GDIILNLSLI DKKDLDDVLG IFKMVISSGL 
SVTPYVKIVS EGESIGDLTV EKGKVGVGTV CSITIDGVLL KAGIPVNPKL GGVVQIRNGV
PVRFTDVLTY VSTTVDPLEI LMSQGITSVS EMLRTGSGKV LANLREAPMV ARDEIESCLS
DLLDAGFSGI LEVGEPNTRV LDVPIERDHL GIVVIGGTNP MAVVQEYGIA IDTSAMSRLI
SFKEMSRIED LV