| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1638 |
|---|
| Symbol | |
|---|
| ID | 3625436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 2019491 |
|---|
| End bp | 2020651 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637700519 |
|---|
| Product | Sep-tRNA:Cys-tRNA synthetase |
|---|
| Protein accession | YP_305163 |
|---|
| Protein GI | 73669148 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1103] Archaea-specific pyridoxal phosphate-dependent enzymes |
|---|
| TIGRFAM ID | [TIGR02539] Sep-tRNA:Cys-tRNA synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTG ACGACTCATC CCTTCAGAAG TTTGGTTTTA TAAAAAGAGA TACCCTTGGC
AGTATAAATA TCGACCCTCT TCAGACAGGT GGGCGTTTGA CCGAGGCTGC AAAACAGGCT
CTTGTAGAGT GGGGAGACGG GTATTCTGTA TGTGATTTCT GTGGAGGGAT TCTGGATCAG
ATAAAAAAGC CTCCAATTTA TGATTTCGTA CATAAGGCCC TTCCCGAGTT TCTTGACTGT
GATGAGGCAA GAGTCACAAA TGGGGCACGG GAATCCAAGT TTGCTGTCAT GCATTCTATT
GGAAAGCCAG GTGACTGGAT TGTGCTCGAT GGGCTTGCTC ATTACTCTTC CTACGTTGCA
GCCGAAAGAG CAGGTCTTAA TATCAAAACT GTACCTCATT CAGGCAGCCC CGATTATTAC
CTTGACCCTG AAGGGTATGC CACGGCAATC GAAGAGGTTA CAAAGGAAAG TGGAAAACCG
CCTGCTCTTG CACTTGTAAC TTATCCGGAC GGGAGTTATG GAAACCTGCC CGATGCAAGA
AAGATAGCGT CTGTCTGCCA TGAATACGAT GTTCCTCTTC TTCTAAATGG CGCATATGCC
GTTGGAAGGA TGCCGGTTTC TGCAAAAGAA ATCGGTGCCG ACTTTATTGC AGGCAGCGGG
CATAAATCGA TGGCTGCATC AGGGCCTGTC GGAGTGCTTG GGGTAAGTGA AGAGTACGCT
CCTATCGTGT TCAGAAAATC CAAATATAAC AAGGTAAAAG AAGTTGAGCT TCTAGGATGC
ACGGCAAGGG GCGCTACGGT TATGACTCTT ATTGCATCTT TCCCGGATGT GGTAAAGCGT
GTTAGAAACT GGGACCAGGA GGTCGAAAAT GCCCGCTGGT TCTCGGCAAG GTTTGAGGAA
ATGGGCTTTA TCCAGCGCGG GCAGAAACCC CATTCTCATG ATCTTATGTT CTTTGAAGCT
CCCCGCTTCT ATGAAATCTC CGAGAAAGTC AAGAAAGGAA GATACTTCCT CTACAAGGAT
CTCAAAGCAC GCAATATTCA CGGCATCAAG TCCGGGCTCA CCAAATATTT CAAACTCAGT
ACTTTCGGGC TCGGGAAGGA AAAGCTCGGT ATTGTTGCGG ACTCCTTTGA AGAGATCCTG
AAGAAGTACG AGGATGTTTA A
|
|---|
| Protein sequence | MKLDDSSLQK FGFIKRDTLG SINIDPLQTG GRLTEAAKQA LVEWGDGYSV CDFCGGILDQ
IKKPPIYDFV HKALPEFLDC DEARVTNGAR ESKFAVMHSI GKPGDWIVLD GLAHYSSYVA
AERAGLNIKT VPHSGSPDYY LDPEGYATAI EEVTKESGKP PALALVTYPD GSYGNLPDAR
KIASVCHEYD VPLLLNGAYA VGRMPVSAKE IGADFIAGSG HKSMAASGPV GVLGVSEEYA
PIVFRKSKYN KVKEVELLGC TARGATVMTL IASFPDVVKR VRNWDQEVEN ARWFSARFEE
MGFIQRGQKP HSHDLMFFEA PRFYEISEKV KKGRYFLYKD LKARNIHGIK SGLTKYFKLS
TFGLGKEKLG IVADSFEEIL KKYEDV
|
|---|
| |