Gene Mbar_A1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1620 
Symbol 
ID3627318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1992468 
End bp1993832 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content45% 
IMG OID637700500 
Productaldehyde dehydrogenase 
Protein accessionYP_305145 
Protein GI73669130 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTA AATCCATTAA CCCTTATACG GAAAAAATAA ACTGGGCTTA TGATTCCTTT 
TCTATCGGGG AATGCAGAGC CCGTATTGAG AAATCCAGAA CTGCTTTTTC CTTATGGGAT
TCACTGCCTG TAGAGGAAAA GGCGAAACAT TTCAAAACTG CTGCCGAAAT TCTTCGGGAG
AGTACCGATA CTTATGCTGA AATTATTACA AAAGAAATGG GGAAACCTGT AAGGCAGTCC
AAGAACGAGG TTCAGAAATG CGCCCAGCTC TGTGATTATT ATGCAGAGAA CTCGACTGAA
CTCCTGAAAG ACGAAATTGT AGATATAGGA ACTGAGAAAA GTTATGTAAC CTTTGAACCT
CTGGGAGTGA TTTTCGGGAT CATGCCCTGG AATTTTCCTT TCTGGCAGGT TTTCAGGTTT
GCAATACCTG CGATGTGTGC AGGAAATGTC TGTGTGCTCA AGCACGCTTC AAATGTGCCA
AAATCGGCGC TGGAAATCGA AAATATCCTC CTTGAGGCCG GATTTCCTGA AAACGTTTTC
AATACTCTGT TAATTGACTC AAAAACTGCC ATGCAGATTC TTAAAGAAGA GCTGGTGGAC
GGGATTTCGT TCACAGGCAG CGTGGGCGCA GGCTCGAAAA TCGGAAAACT TGCAGGGCGA
GGTATCAAAC CTGTAGTACT GGAGCTTGGG GGCTCGGACC CTTTCATAGT TCTTGAGGAT
GCTAACATCG AGAGGGCTGC TCAGGCAGCT GTAAAGTCCC GTTTTCTAAA TGCCGGACAA
AGTTGTACTG CTGCCAAACG ATTGATTGTC GTAGAAGATA TCGTTATGGA TTTTATCGAG
TCGTTTGAAT TCAAAGTGAA GGAACTGAAA ATCGGAGATC CCATGGATGA GAAAACCGAT
ATTGGGCCTC TTGCAAAGAA GGAATTCCTC GGGAGTCTTG AGCGAGTATT AAAAGATGCA
AAAAAGAAAG GTGCAAAACC TCACGTTTAC GGAGAAGAAC ATAAAAAGGG GTTCTTCTTC
AGGCCGACCA TCATTCCTGC AGCCAGTACG GATATGGAAG TGTGCAGGAC TGAAATTTTC
GGGCCAATTG CCCCGGTGAT CACGGTAAAG GATGAGAATG AAGCCGTGGC GATTGCAAAC
TCCACCGAGT ATGGGCTCGG GGCGAAAATC TGGTCAGGAG ATCTGGATAG GGCTGAAAGG
CTGGCAAAAA GAATAAAATC CGGGTCTGTA TCTATCAACG GAATGATCAA ATCCGATCCG
AGGCTTCCTT TTGGCGGGAC TAAAAAATCC GGGGTGGGGC GAGAACTCTC ACACTATGGG
CTCAGGGAAT TTGTGAATAT AAAAACTGTT GTTGTTAATA GATAA
 
Protein sequence
MKLKSINPYT EKINWAYDSF SIGECRARIE KSRTAFSLWD SLPVEEKAKH FKTAAEILRE 
STDTYAEIIT KEMGKPVRQS KNEVQKCAQL CDYYAENSTE LLKDEIVDIG TEKSYVTFEP
LGVIFGIMPW NFPFWQVFRF AIPAMCAGNV CVLKHASNVP KSALEIENIL LEAGFPENVF
NTLLIDSKTA MQILKEELVD GISFTGSVGA GSKIGKLAGR GIKPVVLELG GSDPFIVLED
ANIERAAQAA VKSRFLNAGQ SCTAAKRLIV VEDIVMDFIE SFEFKVKELK IGDPMDEKTD
IGPLAKKEFL GSLERVLKDA KKKGAKPHVY GEEHKKGFFF RPTIIPAAST DMEVCRTEIF
GPIAPVITVK DENEAVAIAN STEYGLGAKI WSGDLDRAER LAKRIKSGSV SINGMIKSDP
RLPFGGTKKS GVGRELSHYG LREFVNIKTV VVNR