Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1607 |
Symbol | |
ID | 3624232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1979244 |
End bp | 1979891 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637700488 |
Product | hypothetical protein |
Protein accession | YP_305133 |
Protein GI | 73669118 |
COG category | [S] Function unknown |
COG ID | [COG2457] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.536381 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGATTGGAC TTTCTCCTGA ACGCAGAAAA AACGGAAGTG ACTCTTCTGC TGCTGATTCT ATCGATTTAT ATTCTTTTGG GATCAGAGAA GGCATTTCCG AAACAATTAT CAGCACAGGC CTGGAATGTC CAAATGCTGC TCCTATCGGA ATAATCGTAA AAGGTGGAAG GACTTTTGTC CGGCTTTTCA AAGGCACCCA CACCTGGGAA AACGTCTCAA AAGAAAAATA TCTTGCCGCA AACGTAGTGT ATGATCCTCT GCTCCTTGTG CGTTCGACTT TTTTCGATCT TGAGCCCTCC GAATTTGACT ATGTGCCTGT CCACGGATTC AGTTTCCCTA TCCTGAAAAC AGCATTGGCC TGGATCGTTT TCGAGTGTAC CGATCTTAAG AATACGGATC ATGCTCTTGT GGCCGACCTT ATTCCTGTAA AAGCAGGTTT CAATGAAGCT AACTGGAAAA GTCTGCCTTT ACCCAACAGG GGATTCAATG CAGTGCTTGA GGCGACTGTC CATGCAACCC GCTATCAGCT TACAGGAGAC GAAAAATATC TCAAACTGAT CCGCCATTAT GAATCACTGG CTTCCAAGTG CGGGGGAGAA AACGAGAAAA AAGCTATGAA ATTGCTTTAT GAGGTCTTGG GGCTGTGA
|
Protein sequence | MIGLSPERRK NGSDSSAADS IDLYSFGIRE GISETIISTG LECPNAAPIG IIVKGGRTFV RLFKGTHTWE NVSKEKYLAA NVVYDPLLLV RSTFFDLEPS EFDYVPVHGF SFPILKTALA WIVFECTDLK NTDHALVADL IPVKAGFNEA NWKSLPLPNR GFNAVLEATV HATRYQLTGD EKYLKLIRHY ESLASKCGGE NEKKAMKLLY EVLGL
|
| |