Gene Mbar_A1607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1607 
Symbol 
ID3624232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1979244 
End bp1979891 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content45% 
IMG OID637700488 
Producthypothetical protein 
Protein accessionYP_305133 
Protein GI73669118 
COG category[S] Function unknown 
COG ID[COG2457] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.536381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTGGAC TTTCTCCTGA ACGCAGAAAA AACGGAAGTG ACTCTTCTGC TGCTGATTCT 
ATCGATTTAT ATTCTTTTGG GATCAGAGAA GGCATTTCCG AAACAATTAT CAGCACAGGC
CTGGAATGTC CAAATGCTGC TCCTATCGGA ATAATCGTAA AAGGTGGAAG GACTTTTGTC
CGGCTTTTCA AAGGCACCCA CACCTGGGAA AACGTCTCAA AAGAAAAATA TCTTGCCGCA
AACGTAGTGT ATGATCCTCT GCTCCTTGTG CGTTCGACTT TTTTCGATCT TGAGCCCTCC
GAATTTGACT ATGTGCCTGT CCACGGATTC AGTTTCCCTA TCCTGAAAAC AGCATTGGCC
TGGATCGTTT TCGAGTGTAC CGATCTTAAG AATACGGATC ATGCTCTTGT GGCCGACCTT
ATTCCTGTAA AAGCAGGTTT CAATGAAGCT AACTGGAAAA GTCTGCCTTT ACCCAACAGG
GGATTCAATG CAGTGCTTGA GGCGACTGTC CATGCAACCC GCTATCAGCT TACAGGAGAC
GAAAAATATC TCAAACTGAT CCGCCATTAT GAATCACTGG CTTCCAAGTG CGGGGGAGAA
AACGAGAAAA AAGCTATGAA ATTGCTTTAT GAGGTCTTGG GGCTGTGA
 
Protein sequence
MIGLSPERRK NGSDSSAADS IDLYSFGIRE GISETIISTG LECPNAAPIG IIVKGGRTFV 
RLFKGTHTWE NVSKEKYLAA NVVYDPLLLV RSTFFDLEPS EFDYVPVHGF SFPILKTALA
WIVFECTDLK NTDHALVADL IPVKAGFNEA NWKSLPLPNR GFNAVLEATV HATRYQLTGD
EKYLKLIRHY ESLASKCGGE NEKKAMKLLY EVLGL