| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1561 |
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| Symbol | |
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| ID | 3625978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 1922425 |
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| End bp | 1924512 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637700442 |
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| Product | formate dehydrogenase, alpha subunit (F420) |
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| Protein accession | YP_305088 |
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| Protein GI | 73669073 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTGA AATATGTGCC CACGACCTGT CCTTACTGTG GGACAGGATG TGGGTTTAAC
ATTGTGGTAA AAGATGGGAG GGCTGCAGGC ATTGAGCCCT GGCACCGGGC TCCCGTTAAT
GCAGGAAAGC TCTGTCAAAA GGGCAGATAC GCTCATGAGT TCATCCATAG CAAGGATAGA
CTTGTAAAGC CGCTGGTCAG GGAAAACGGG AAGCTTGTAG AGACAAGTTG GGAAGAAGCC
CTGGCCCTTA TAGCAGGGAA ATTCATGACT TTTCTCCCTG AAGAAATTGC CTGCCTCTCT
TCGGCAAGAA CCTCGAACGA AGAAAACTAC CTTATGCAGA AATTCGCCCG TGCTGTCCTT
AAGACTTCTA ACGTTGACCA TTGCGCAAGG CTCTGTCATT CCTCTACAGT CGCTGGCCTT
GCCGCAGTTT TTGGCTCGGG AGCCATGACG AATTCCATCC TGGACATTGA AGAGTCTAAA
TGCATTTTCA TTATCGGTAG CAATACCCTC GAGCAGCATC CACTCATCGG AAGGAGAGTA
ATGCTTGCGA AAAAGAAGGG GGCCAAAATA GTCTGTGCAG ACCCTCGTTG CACGCCCACA
GCAAAACAGG CAGACCTCCA TCTTTCTATG TATTCAGGTA CGGACGTTTC TCTCCTAAAT
GGACTCATGC ACCATATTAT AGAAAATGGC TGGGAAGATT CGGTATTTAT CTCAAAAAGG
ACAAAAAATT ATGAGGAAAT GAGATCCGTG GTCATACAGG AGGCCTATTC CCTGCCAAAC
GTCTCAAAAA TCACAGGGGT GCCAGAAAAT GACTTAAAAA CCGCAGCCGA GTGGATTGCC
CAATCAAAAC CATCGGCCCT CATTTATTCA ATGGGCATCA CCCAACATAC GGTGGGAGTT
GACAACGTGA GATCCACGGC AAATTTAATG CTTCTAACTG GAAATCTCGG AGTTGCCGGA
GGGGGAGTCA ACCCCCTGCG GGGACAAAAT AATGTACAGG GAGCATGTGA TATGGGCTGC
CTGCCGGATG TGTATCCTGG ATACCAGAAG GTTGCAGATC CGGAAAACCA CAGGAAAATG
GAATCTATCT GGGGGGTGAG CGGACTTCCG AAAGCTCCAG GGCTTACGGT TACGGAGCTG
ATGGAACAGC TTGCAGAAGG AACATCGACT GTGAAGTGCA TGTATGTTAT GGGAGAAAAT
TTCATGCTCT CGGACCCGGA TCTAAACAAG GTAAGAAAAG CCATGAAGCA ACTGGACTTT
CTGGTCGTGC AGGATATTTT CCTGAGCGAG ACTGCAAATC TTGCTGATGT TGTCTTGCCT
GCGGCCTGTT ATGCAGAAAA GAACGGGACC CAGACCAATA CTGAACGTCG AGTACAGCGG
ATTAGGAAAG CCGTAGACCC TCCTGGAGAT GCTAAGGCAG ACTGGCGCAT CATCTGCGAA
CTTGCCGGGT GTATGGGGTA CGGGCCTCAA TTTTCCTACA TGAACGAAGC GGAGATTTTT
GAGGAAATCG CAAAGGTTAC CCCCCAGTAT GGGGGCATGA GTTATGAGCG CCTTGAAAAA
CCTGACTCTC TTCAGTGGCC CTGCCCGGAT AAAACTCATC TAGGAACTCC AATCCTGCAT
ACCGAAAAAT TTTCCACCTC TGATGGGCTG GCGGAGTTTT CTGGCATTGA ATGGAAGCCC
CCAGCCGAAG TTCCGGATGT GGAATATCCT TTCATTCTTA CTACAGGAAG GAACATCTGG
CACTGGCATA CAGGGACTAT GACTCGCAGG TCGAAAACCC TTGCTTCCGA AGTCAGAACC
GGCTGGGTGG AGCTTCATCC GGAAGATGCG AAAAAGTTAG GAATCCGCAA CCGAGAAACA
GTCCGCGTAC TTTCCCGGAG AGGGAAGATC GAAATCCCTT CAATGGTCAC AGAAGACATA
AAACCCGGGG TTGTCTTCAT ACCTTTTCAT TTTAAGGAAT GTGCAGCCAA CCTGCTGACT
AACGGAGCTC TCGATCCCGT GGCAAAGATT CCGGAGTACA AGGCATGTGC GGTAAAAATT
GAGAAAATAG AACCTCAAGA AGGTAAACTT TTGGAGGAAA AGCTTTGA
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| Protein sequence | MELKYVPTTC PYCGTGCGFN IVVKDGRAAG IEPWHRAPVN AGKLCQKGRY AHEFIHSKDR
LVKPLVRENG KLVETSWEEA LALIAGKFMT FLPEEIACLS SARTSNEENY LMQKFARAVL
KTSNVDHCAR LCHSSTVAGL AAVFGSGAMT NSILDIEESK CIFIIGSNTL EQHPLIGRRV
MLAKKKGAKI VCADPRCTPT AKQADLHLSM YSGTDVSLLN GLMHHIIENG WEDSVFISKR
TKNYEEMRSV VIQEAYSLPN VSKITGVPEN DLKTAAEWIA QSKPSALIYS MGITQHTVGV
DNVRSTANLM LLTGNLGVAG GGVNPLRGQN NVQGACDMGC LPDVYPGYQK VADPENHRKM
ESIWGVSGLP KAPGLTVTEL MEQLAEGTST VKCMYVMGEN FMLSDPDLNK VRKAMKQLDF
LVVQDIFLSE TANLADVVLP AACYAEKNGT QTNTERRVQR IRKAVDPPGD AKADWRIICE
LAGCMGYGPQ FSYMNEAEIF EEIAKVTPQY GGMSYERLEK PDSLQWPCPD KTHLGTPILH
TEKFSTSDGL AEFSGIEWKP PAEVPDVEYP FILTTGRNIW HWHTGTMTRR SKTLASEVRT
GWVELHPEDA KKLGIRNRET VRVLSRRGKI EIPSMVTEDI KPGVVFIPFH FKECAANLLT
NGALDPVAKI PEYKACAVKI EKIEPQEGKL LEEKL
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