Gene Mbar_A1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1533 
Symbol 
ID3625247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1891593 
End bp1892246 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content45% 
IMG OID637700417 
Producthypothetical protein 
Protein accessionYP_305064 
Protein GI73669049 
COG category[R] General function prediction only 
COG ID[COG1926] Predicted phosphoribosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.73269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTTT TTGAAGACCG GGTGGATGCC GGGAAAAAGC TTGCAAAAGA ACTTTCGAAA 
TATGCAAATC GCTCAGATGT GTTGATACTT GCGCTCCCAC GCGGTGGGGT TCCGGTAGCA
TTTGAAGTTG CAAAGGAACT TAATGTAAAA ATGGATGTGT TTATAGTAAG GAAGCTGGGA
GTACCCGGAA ATGAAGAGCT GGCAATGGGA GCGATCTCTT CTGACAATGT CCTTGTGTTG
AATGAAGACA TTGTCAGTTC TTTTCAGATA TCTGAAAAAG TAATTAATAT GGTATCTGAG
AATGAGCTCA AGGAACTTAA ACGCAGGGAA CGCATTTACC GTGGAGATAG GCCTAAGCCA
GAGATTAGCG ACTCGACTGT GATTTTAATA GATGACGGGC TCGCTACAGG TGCGACAATG
CGTGCAGCTG TATCTGCTAT TAAAACCAAA AACCCGGCTA AAATAGTGGT TGCAGTACCC
ACGGGTGCAC CGGACACGTG TGAGCTTTTC AAAATGGAAG TAGACGAAGT AATATGTATA
GCCACCCCTG AACCTTTCTA TGGGGTTGGA GCCTGGTACG GAAACTTCAG TCAAACCACC
GATGAAGAGG TCTGCAAACT TCTGGATAAA GCAAGAGCCC TTCCGGCAAG ATAA
 
Protein sequence
MALFEDRVDA GKKLAKELSK YANRSDVLIL ALPRGGVPVA FEVAKELNVK MDVFIVRKLG 
VPGNEELAMG AISSDNVLVL NEDIVSSFQI SEKVINMVSE NELKELKRRE RIYRGDRPKP
EISDSTVILI DDGLATGATM RAAVSAIKTK NPAKIVVAVP TGAPDTCELF KMEVDEVICI
ATPEPFYGVG AWYGNFSQTT DEEVCKLLDK ARALPAR